Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00852 ATGAGCTACAGTGGACGTGATTGGATGTGTGGTGTTTGCCAGCATGTTAATTTTAGGAGGAGGGATGCATGCCAACGTTGTGGGTATCCCAAATTTGGAGGTCCTGATGAGTTTTCTTCAACCTGTGGAAGCAATAAGAACAGTGAAGCATTGCCAGGAGACTGGTATTGCAGCGCAGAGAACTGTGGAGCCCACAACTATGCAAGCCGATCAAAATGCTTTAGATGTGCTGCTCTAAAAGATGACAATGGTGTTTCTGATCACAGATATGGACTTGGCAGCAGCAGCTTGCATCCACCACCCGGATGGAAGCCTGGTGATTGGATGTGTTCTAGCTGTGGAACGCATAACTACGCTAGCAGGGAGGAATGCTTCAAGTGCAAAACACCAAATCACGATGGTGAGAAAAGTTAA 414 0.4686 MSYSGRDWMCGVCQHVNFRRRDACQRCGYPKFGGPDEFSSTCGSNKNSEALPGDWYCSAENCGAHNYASRSKCFRCAALKDDNGVSDHRYGLGSSSLHPPPGWKPGDWMCSSCGTHNYASREECFKCKTPNHDGEKS 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00852 137 SUPERFAMILY Ran binding protein zinc finger-like 101 133 IPR036443 -
Accr12g00852 137 Pfam Zn-finger in Ran binding protein and others 52 80 IPR001876 -
Accr12g00852 137 Pfam Zn-finger in Ran binding protein and others 104 131 IPR001876 -
Accr12g00852 137 Pfam Zn-finger in Ran binding protein and others 5 31 IPR001876 -
Accr12g00852 137 ProSiteProfiles Zinc finger RanBP2 type profile. 104 133 IPR001876 -
Accr12g00852 137 ProSiteProfiles Zinc finger RanBP2 type profile. 51 82 IPR001876 -
Accr12g00852 137 SUPERFAMILY Ran binding protein zinc finger-like 45 83 IPR036443 -
Accr12g00852 137 Gene3D - 42 83 - -
Accr12g00852 137 Gene3D - 101 134 - -
Accr12g00852 137 Gene3D - 2 35 - -
Accr12g00852 137 PANTHER ZINC FINGER PROTEIN 46 132 - -
Accr12g00852 137 ProSiteProfiles Zinc finger RanBP2 type profile. 3 33 IPR001876 -
Accr12g00852 137 SMART zf_4 6 30 IPR001876 -
Accr12g00852 137 SMART zf_4 106 130 IPR001876 -
Accr12g00852 137 SMART zf_4 53 79 IPR001876 -
Accr12g00852 137 ProSitePatterns Zinc finger RanBP2-type signature. 8 27 IPR001876 -
Accr12g00852 137 ProSitePatterns Zinc finger RanBP2-type signature. 55 76 IPR001876 -
Accr12g00852 137 SUPERFAMILY Ran binding protein zinc finger-like 3 34 IPR036443 -
Accr12g00852 137 ProSitePatterns Zinc finger RanBP2-type signature. 108 127 IPR001876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00852 Accr-Chr12 8571710 8572881 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00852 - - pcin:129319393 249.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr12g00852 12 8571710 8572881 Accr8g00962 8 24169213 24170849 CCT