Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00507 ATGGATCCGAACCCCGGAACCTTCCCTATTCTATCCTACGTCATGAGTCGTCTCCCTTCTCTGGCCTCTACTTCTAGACCCCCCACCTCCCCTGAATTCGATATCGAACAACCTCATCCTCTGCCGCCGCCACCCCATCTTCCTTCATCTTCTTCGCCTGAATCTGAAATTGTGGGCAAAATGCCTCAACTTACTGACCCCAAACTCTTGGCTTCCATGACCCGCGCGGTCTCCGAAGTCGCCCAGACCCGATCAGTACTCAAGCTCATTGGGGATCGACCGGACCACGAAGACGTCGATCGTGCAAAAGCCAAGCTTGCGGATATTGAAGCCCTTTTGTCCAAGCAACTTGAGGAGATTGTGCGGTCCCCGAGGCCCGAGAATGTTGACATCCTTCAATGGCGAGCTCATCAAGCCGAAAAAGAGAAGGAGTGCAGGGAATCAGCGGAGAAAGAGAAGCGGCCGTATAAATCACTCTTACAGTTGGACGAGATGCATGATGCTTATGAGAAAATGCTTACGGATGCGGAGAAGAGGCTGGTGAAAATTTACGAGTCTGATGGGAAAGTAGCTGATAGTGCCGAGGGTGAGGAAGATGAGCATGTTGGGGAGGAGGTTAACGAAGAGGTTGTGGGGATACTACGGGAGGCTTATGGAAAGGGGATGGACCGATTGGATCTTCCAGGGCGGCGGTTAAGGTTTTTGCCCGAGGCCTTTGGGCGAATTCCTGGCTTGGTTGCGCTTAATCTTTCGAACAATCTGCTCGAGGTGATCCCTGACTCAATCGCTGGGTTGCAAAGTCTTGAGGAGCTTAACGTCTCTTCAAATCTTTTGGAGTCTCTTCCAGATTCAATTGGCTTTTTACAAAAGTTGAAATTTCTGAATGTCTCTGGGAACAGGCTAAGTGCCCTTCCTGATTCCATCTGTCATTGCAGGTCACTTGTGGAGCTTGATGTAAGCTTCAATGGGCTGACATATCTGCCTACAAACATTGGACTTGAACTGGTGAACTTACAGAAGCTGTTAATTCAATTGAACAAGATTCGGTCTCTTCCATCGTCTGTTTGTGAAATGAGGGCCTTGCGCTATCTAGATGCTCATTTTAATGAGCTTCATGGGCTTCCTGTTGCTATAGGGAAATTGACTAATCTTGAAGTTCTCAACCTGAGCAGTAATTTCAGTGACCTTAGAGAACTTCCCGATACATTTGGTGATCTGACTAACCTCAGGGAATTGGATCTCAGCAACAATCAGATTCATGCGCTTCCGGATACATTTGGCCGCCTCAATAGTCTGGTCAAGCTCAACTTGGAGCAGAACCCTCTGGAATTGCCACCAAAGGAAATTGTAAATGAAGGGGTTGAGGCCATAAAAACTTTTATGGCTAAGAGGTGGGTTGATATATTGCTTGAGGAAGAAAGGAAAAGCCATGAAATTCAGGAACTGGCAGAGGGTGGCTGGTTAACACGAGGCACCTCCTGGTTGAAGAATTATGCATCTAATGTTTCCCGAAGTGTTTCCGAGTATCTGGGATCTGCCATAGGATCACCTAGGACTCCAAGAGATCCTTGTCTTGATCAGCAGCTTTAA 1590 0.4786 MDPNPGTFPILSYVMSRLPSLASTSRPPTSPEFDIEQPHPLPPPPHLPSSSSPESEIVGKMPQLTDPKLLASMTRAVSEVAQTRSVLKLIGDRPDHEDVDRAKAKLADIEALLSKQLEEIVRSPRPENVDILQWRAHQAEKEKECRESAEKEKRPYKSLLQLDEMHDAYEKMLTDAEKRLVKIYESDGKVADSAEGEEDEHVGEEVNEEVVGILREAYGKGMDRLDLPGRRLRFLPEAFGRIPGLVALNLSNNLLEVIPDSIAGLQSLEELNVSSNLLESLPDSIGFLQKLKFLNVSGNRLSALPDSICHCRSLVELDVSFNGLTYLPTNIGLELVNLQKLLIQLNKIRSLPSSVCEMRALRYLDAHFNELHGLPVAIGKLTNLEVLNLSSNFSDLRELPDTFGDLTNLRELDLSNNQIHALPDTFGRLNSLVKLNLEQNPLELPPKEIVNEGVEAIKTFMAKRWVDILLEEERKSHEIQELAEGGWLTRGTSWLKNYASNVSRSVSEYLGSAIGSPRTPRDPCLDQQL 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00507 529 ProSiteProfiles Leucine-rich repeat profile. 408 429 IPR001611 GO:0005515
Accr12g00507 529 PRINTS Leucine-rich repeat signature 291 304 - -
Accr12g00507 529 PRINTS Leucine-rich repeat signature 406 419 - -
Accr12g00507 529 SMART LRR_typ_2 429 452 IPR003591 -
Accr12g00507 529 SMART LRR_typ_2 381 405 IPR003591 -
Accr12g00507 529 SMART LRR_typ_2 335 358 IPR003591 -
Accr12g00507 529 SMART LRR_typ_2 265 286 IPR003591 -
Accr12g00507 529 SMART LRR_typ_2 288 311 IPR003591 -
Accr12g00507 529 SMART LRR_typ_2 312 334 IPR003591 -
Accr12g00507 529 SMART LRR_typ_2 242 264 IPR003591 -
Accr12g00507 529 SMART LRR_typ_2 406 428 IPR003591 -
Accr12g00507 529 ProSiteProfiles Leucine-rich repeat profile. 267 288 IPR001611 GO:0005515
Accr12g00507 529 SUPERFAMILY L domain-like 223 446 - -
Accr12g00507 529 Gene3D Ribonuclease Inhibitor 159 339 IPR032675 -
Accr12g00507 529 Coils Coil 159 179 - -
Accr12g00507 529 ProSiteProfiles Leucine-rich repeat profile. 290 311 IPR001611 GO:0005515
Accr12g00507 529 SMART LRR_bac_2 406 425 - -
Accr12g00507 529 SMART LRR_bac_2 265 284 - -
Accr12g00507 529 SMART LRR_bac_2 288 307 - -
Accr12g00507 529 SMART LRR_bac_2 311 330 - -
Accr12g00507 529 SMART LRR_bac_2 242 261 - -
Accr12g00507 529 SMART LRR_bac_2 358 377 - -
Accr12g00507 529 SMART LRR_bac_2 335 354 - -
Accr12g00507 529 SMART LRR_bac_2 381 402 - -
Accr12g00507 529 Coils Coil 99 119 - -
Accr12g00507 529 Gene3D Ribonuclease Inhibitor 340 463 IPR032675 -
Accr12g00507 529 FunFam Plant intracellular Ras-group-related LRR protein 9 141 326 - -
Accr12g00507 529 Pfam Leucine rich repeat 267 324 IPR001611 GO:0005515
Accr12g00507 529 Pfam Leucine rich repeat 400 442 IPR001611 GO:0005515
Accr12g00507 529 MobiDBLite consensus disorder prediction 20 66 - -
Accr12g00507 529 PANTHER - 335 451 - -
Accr12g00507 529 FunFam Plant intracellular Ras-group-related LRR protein 2 330 502 - -
Accr12g00507 529 MobiDBLite consensus disorder prediction 33 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00507 Accr-Chr12 4673524 4676127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00507 251 450 Receptor kinase-like Gene Family AT5G20480 33.803 6.89e-18 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00507 - - gmx:100803823 699.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g00234 8 3101176 3103626 Accr12g00507 12 4673524 4676127 CCT
Accr12g00507 12 4673524 4676127 Accr12g00507 12 4673524 4676127 ECH