Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1228 ATGTCTGTTTCCATGAGAGATTTGGATCCAGCTTTCCAGGGAGCTGGACAAAAGGCGTATCCTAAATCTAATAAGGATATTATGCTTGGACTTGAAATATGGCGCATTGAGAATTTAAAACCAGTTGTTGTTCCCACATCCTCCTATGGGAAATTTTTCACTGGGGATTCCTACGTGATCTTGAAGACAACAGCTTCAAAAAGTGGCGCACTGCATCATGATATCCACTATTGGCTGGGAAAAGACACCAGTCAGGATGAAGCTGGTGTTGCAGCCATCAAAACAATTGAGCTGGATGCAGCTCTTGGAGGACGTGCTGTTCAGTATCGCGAATCACAGGGTCATGAAACTGAAAAGTTCTTGTCTTATTTCAGACCATGTATAATTCCTCAAGAAGGTAGAGTTGCCTCTGGTTTTAAACATGTTGAGGCTGAAAAACATACAACACGTTTGTATGCATGCCAGGGGAAACATGTTGTTCCTTTTGCAAGATCAACGCTCACCCATGATGATGTTTTTATTCTGGATACCCAGTCTAAATTATTTCAATTCAATGGTTCTAATTCATCTATTCAAGAAAGGGCTAAAGCATTGGAAGTTCTACAGTATATAAAGGATAACTACCATGATGGGAAATGTGAGATTGCCTCTGTTGAGGATGGAAGGTTGATGGCTGATGCTGATGCTGGAGAATTTTGGGCCTTATTTGGCGGTTTTGCTCCTCTTCCACGGAAAACAGCCAGTGATGATGATAATACTGTTGATTCTCAGCCTCCAAAGCTGCTGTGTATTGTGAATGGGAAGGCAGAACCTATTGAGAATGATTCCTTGACAAGAGAACTACTAGACACAAACAAATGTTATATTCTTGATTGTGGTTTGGAAGTTTTTGTTTGGAAGGGAAGAAACACCTCTCTGAATGAAAGAAAAAGTGCAAGTGCTGCTGCAGAAGAATTAATCAGCGGCCCTGATCGAGCAAAATCCCACGTAGTTCGTGTGATTGAAGGATTTGAAACTGTGATGTTCAAGTCCAAATTTGATTCTTGGCCTCAAACACCTAATGTAACTGTGTCAGAAGATGGCCGTGGCAGGGTGGCAGCACTTCTAAGGCGTCAAGGAGTGGATGTTAAGGGTCTGTTGAAAGCTGATCCAGTAAAAGAAGAACCTCAACCCCACATTGATTGCACAGGACGTATGCAGGTTTGGCGGCTGAATGGCCAGGAAAAGACTCTCCTTCAAGAATCTGATCAATCAAAACTTTTTAGTGGAGATTGCTATGTCTTTCTCTACTCATATCCAGGAGAAGATAGAGAAGAGCATCTTGTAATGACATGGATTGGAAAGAACAGTGTTGAGGCTCGAATTTATGAAGGGAATGAACCGATTCAGTTTTATTCTATCCTCCAAACCTTAATTGTTTATAAGGGTGGTCTTAGTGAAGGATATAAGAATTACATTAAGGAGAAGGAAATTCCAGATGATACTTACAAGGAAGATGGTATAGCACTGTTCCGCATCCAGGGCTCTGGACCTGAAAGTATGCAAGCTATACAAGTGGAACCTGTTGCTTCCTCCTTGAATTCCTCATATTGCCACATACTTCATGATGGGCCCACAGTCTTCACTTGGCTAGGGAGCCTTACAAACACAGATGACCATGAACTAATTGAGAGGATGCTGGATTTGATAACGCCGGAATTACAAACCAAACAACATAAGGAAGGTTCAGAGTCTGAACAGTTTTGGGATTTGTTAGGAGGAAAATTAGAATATCCCAGTCAAAAGGTTGTAAGGGATGCTGAAAGAGATCCTCACCTATTTTCTTGCAACTTCTCAAAAGAAATTTTGAAGGTGACAGAAGTGTACAACTTCTCCCAGGATGATTTAATGACTGAAGATATAATGATCTTGAATTGTCACTCAGAAATCTTTGTCTGGGTTGGCCAGCAAATTGACCTCAATAGTAGAACAAAGGCTCTAACAATTGGTGAGAAATTTCTTGAGCATGATTTTTGTATGGAGAATTTATCTCGTGAAGCTCCAATATTTGTTATCATTGAAGGGAGTGAACCAACTTTTTTCACTCGCTTCTTCAAATGGGAGTCTGCAAAATCTGCTATGCTGGGAAACTCATTTCAAAGGAGGCTTACAATACTGAAAAATGGGGGCAGTGCCCCTTTGGATAGACCAAAACGGAGAACAACAGTATCATATGGAGGAAGGTCCAGTGGTGCACCGGAAAAGGCACAGCGTTCTCGCAGTGTGTGCGCTACACCAGACCGTGTTCGTGTGAGAGGCAGGTCACCAGCATTTAATGCATTAGCAGCTACATTTGAAGGTCCCAAGGACAGAAACCTTTCAACTCCACCTCCTATGATTAGGAAGCTGTATGCGAAATCTCTGACCCAAGATTCAGTAAAATTGGCACCCAAATCTGCTGCTATAGCTTCTCTTACTTCAAGTTTTGAATCATTCCGCCCATCAAAAGAAAATCTTATTCCTCGATCATTCAGAGTGAAACGGGAGGCCTCGAAGCCGGAGACAAGTAAAGAGAGAGACTCTATGAGCAGTATAGAAGAAGGTGTGAAAGAGGGTGAAGCTGATGACGATGAAGGTCTCCCAGTTTATCCATATGAACGCCTCAAAATAGGATCTGATGATCCTGTGGCAGACATTGATGTGACCAGGAGAGAGGCTTATATGTCAGCTGAGGATTTCAAAGAGAAGTTTGGGATGACAAAAAAGGATCTCTACAAGTTGCCCAAATGGAAACAGAACAAACTCAAGATGGCCATTCACTTATTTTGA 2808 0.4188 MSVSMRDLDPAFQGAGQKAYPKSNKDIMLGLEIWRIENLKPVVVPTSSYGKFFTGDSYVILKTTASKSGALHHDIHYWLGKDTSQDEAGVAAIKTIELDAALGGRAVQYRESQGHETEKFLSYFRPCIIPQEGRVASGFKHVEAEKHTTRLYACQGKHVVPFARSTLTHDDVFILDTQSKLFQFNGSNSSIQERAKALEVLQYIKDNYHDGKCEIASVEDGRLMADADAGEFWALFGGFAPLPRKTASDDDNTVDSQPPKLLCIVNGKAEPIENDSLTRELLDTNKCYILDCGLEVFVWKGRNTSLNERKSASAAAEELISGPDRAKSHVVRVIEGFETVMFKSKFDSWPQTPNVTVSEDGRGRVAALLRRQGVDVKGLLKADPVKEEPQPHIDCTGRMQVWRLNGQEKTLLQESDQSKLFSGDCYVFLYSYPGEDREEHLVMTWIGKNSVEARIYEGNEPIQFYSILQTLIVYKGGLSEGYKNYIKEKEIPDDTYKEDGIALFRIQGSGPESMQAIQVEPVASSLNSSYCHILHDGPTVFTWLGSLTNTDDHELIERMLDLITPELQTKQHKEGSESEQFWDLLGGKLEYPSQKVVRDAERDPHLFSCNFSKEILKVTEVYNFSQDDLMTEDIMILNCHSEIFVWVGQQIDLNSRTKALTIGEKFLEHDFCMENLSREAPIFVIIEGSEPTFFTRFFKWESAKSAMLGNSFQRRLTILKNGGSAPLDRPKRRTTVSYGGRSSGAPEKAQRSRSVCATPDRVRVRGRSPAFNALAATFEGPKDRNLSTPPPMIRKLYAKSLTQDSVKLAPKSAAIASLTSSFESFRPSKENLIPRSFRVKREASKPETSKERDSMSSIEEGVKEGEADDDEGLPVYPYERLKIGSDDPVADIDVTRREAYMSAEDFKEKFGMTKKDLYKLPKWKQNKLKMAIHLF 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1228 935 Gene3D Severin 385 503 IPR029006 -
Acco13g1228 935 CDD gelsolin_S5_like 499 588 - -
Acco13g1228 935 CDD gelsolin_S6_like 603 700 - -
Acco13g1228 935 MobiDBLite consensus disorder prediction 722 751 - -
Acco13g1228 935 Gene3D Severin 596 714 IPR029006 -
Acco13g1228 935 SUPERFAMILY Actin depolymerizing proteins 28 157 - -
Acco13g1228 935 PANTHER VILLIN 9 925 IPR007122 GO:0051015
Acco13g1228 935 Gene3D Severin 17 142 IPR029006 -
Acco13g1228 935 Gene3D Villin headpiece domain 873 935 IPR036886 GO:0003779|GO:0007010
Acco13g1228 935 SUPERFAMILY VHP, Villin headpiece domain 864 935 IPR036886 GO:0003779|GO:0007010
Acco13g1228 935 Gene3D Severin 253 360 IPR029006 -
Acco13g1228 935 SUPERFAMILY Actin depolymerizing proteins 387 510 - -
Acco13g1228 935 SUPERFAMILY Actin depolymerizing proteins 493 596 - -
Acco13g1228 935 Pfam Gelsolin repeat 159 221 IPR007123 -
Acco13g1228 935 Pfam Gelsolin repeat 40 121 IPR007123 -
Acco13g1228 935 Pfam Gelsolin repeat 275 342 IPR007123 -
Acco13g1228 935 Pfam Gelsolin repeat 620 692 IPR007123 -
Acco13g1228 935 SUPERFAMILY Actin depolymerizing proteins 577 699 - -
Acco13g1228 935 MobiDBLite consensus disorder prediction 836 873 - -
Acco13g1228 935 CDD gelsolin_S1_like 12 133 - -
Acco13g1228 935 Gene3D Severin 504 595 IPR029006 -
Acco13g1228 935 SUPERFAMILY Actin depolymerizing proteins 145 248 - -
Acco13g1228 935 Pfam Villin headpiece domain 900 935 IPR003128 GO:0003779|GO:0007010
Acco13g1228 935 SMART VILL_6 604 701 IPR007122 GO:0051015
Acco13g1228 935 SMART VILL_6 257 349 IPR007122 GO:0051015
Acco13g1228 935 SMART VILL_6 29 127 IPR007122 GO:0051015
Acco13g1228 935 SMART VILL_6 147 239 IPR007122 GO:0051015
Acco13g1228 935 SMART VILL_6 501 588 IPR007122 GO:0051015
Acco13g1228 935 SMART VILL_6 397 471 IPR007122 GO:0051015
Acco13g1228 935 FunFam Gelsolin 16 141 - -
Acco13g1228 935 CDD gelsolin_S3_like 259 348 - -
Acco13g1228 935 Gene3D Severin 143 252 IPR029006 -
Acco13g1228 935 SMART VHP_1 900 935 IPR003128 GO:0003779|GO:0007010
Acco13g1228 935 FunFam Villin-4 253 359 - -
Acco13g1228 935 FunFam Gelsolin 500 594 - -
Acco13g1228 935 FunFam Villin-like 1 595 716 - -
Acco13g1228 935 PRINTS Gelsolin family signature 514 534 IPR007122 GO:0051015
Acco13g1228 935 PRINTS Gelsolin family signature 416 432 IPR007122 GO:0051015
Acco13g1228 935 PRINTS Gelsolin family signature 574 593 IPR007122 GO:0051015
Acco13g1228 935 PRINTS Gelsolin family signature 328 349 IPR007122 GO:0051015
Acco13g1228 935 PRINTS Gelsolin family signature 626 648 IPR007122 GO:0051015
Acco13g1228 935 PRINTS Gelsolin family signature 655 674 IPR007122 GO:0051015
Acco13g1228 935 SUPERFAMILY Actin depolymerizing proteins 229 354 - -
Acco13g1228 935 ProSiteProfiles Headpiece (HP) domain profile. 870 935 IPR003128 GO:0003779|GO:0007010
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1228 Acco-ChrAcco13 10693510 10700564 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco13g1228 13 10693510 10700564 Acco04g1220 04 12283493 12291828 CCT