Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1220 ATGGCTGTTTCTATGAGGGACTTGGATTCATCTTTCCAGGGAGCTGGACAAAAGGCTGGCCTGGAAATATGGCGTATTGAGAATTTCAATCCAGTTCCCATCCCGAAGTCCTCTTATGGGAAGTTTTTCACTGGGGACTCCTATGTAATCTTGAAGACAACTGCTTCAAAGAGTGGTGCCCTGCGTCATGATATTCATTACTGGCTTGGGAAAGACACCAGTCAGGATGAAGCTGGTGCTGCAGCCGTCAAGACAGTTGAGCTTGATGCAGCTCTTGGAGGCCGTGCTGTTCAATATCGTGAAGTGCAGGGTCATGAAACTGAAAAGTTCCTTTCTTACTTCAAACCCTGTATTATACCTCAGGAGGGCGGAGTTGCATCTGGTTTTAAGCATGTAGAGGATGAAGAATATAAGATCCGAATGTTTGTGTGCAAAGGGAAACATGTTGTGCATGTCAAAGAGGTTCCTTTTGCCCGATCATCACTAAACCATGATGATATATTTATTCTGGATACGAAATCCAAAATCTTCCAATTTAATGGTTCAAATTCATCTATTCAAGAAAGGGCTAAAGCATTGGAAGTTGTGCAATATATTAAAGATACACACCATGATGGGAAATGCGAGGTAGCTGCTATTGAGGATGGAAAGTTGATGGCTGATCCTGAAACGGGAGAATTCTGGGGTTTCTTTGGGGGTTTTGCCCCTCTTCCACGAAAACCAGCCAGTGATGATGATCAGCATGTTGATACTCATCCTCCAATGCTGCTTAGCATTGAAAAGGGGGTAGCTGAACCCGTTAAGAATGAATCTCTGACAAGGGAGTTACTGGACACAAATAAATGCTATATTCTTGATTGTGGGCTGGAAGTGTTTGTCTGGATGGGAAGAAATACCTCTCTTGATGAAAGAAAAAGTGCAAGTGGAGCGGCTGATGAGTTAGTCAGTGGCTCCGATCGACAGAAATCCCAGATAATTCGTGTAATTGAAGGATTTGAAACAGTGATGTTCAAGTCCAAGTTTGATTCTTGGCCTGAAACGACTGAAGTAACTGTGTCTGAAGATGGTCGTGGAAAGGTGGCAGCACTTCTGAAACGCCAAGGAGTGAATGTCAGGGGTCTGCTGAAAGCTGATCCAGTAAAAGAAGAACCTCAACCCTATATTGATTGCACAGGAAATTTGCAGGTTTGGCGTGTAAATGGTCAGGAAAAGATTCTCCTTCCTGCTTCTGATCAGTCAAAGCTTTATAGCGGAGATTGCTACATCTTTCAGTATACGTATCCTGGAGATGATAAGGAAGAGTATCTTATAGGAACATGGATTGGAAAGACTAGTGTTGAGGAAGAAAGAGCTTCAGCTATTTCACTGGCAAGCAAAATGGTTGAGTCATTGAAGTTTCTTCCTTCCCAGACTCGTATTTATGAAGGGAATGAGCCAATTCAATTTTATACTATCTTCCAAAGCTTGATTGTTTTTAAGGGTGGACTTAGTAATGGATACAAAAATTACATTGCGGAAAAGGAAATTCCTGATGATACGTACAGTGAGGATGGTGTTGCACTATTTCGCATCCAGGGTTCAGGCCCAGACAATATGCAAGCTATACAAGTTGAACCAGTTGCTTCCTCATTGAATTCCTCTTACTGCTACATACTTCATAATGGGTCCGCTGTCTTTACATGGATTGGAAACCTTACAACATCAGATGTTCAGGAACTTGTTGAGAGAATGCTGGATTTGATAAAGCCAAATTTACAATCAAAGCCCCAAAAGGAAGGGTCAGAATCTGAACAGTTTTGGGATTTGTTGGGAGGAAAATCTGAGTATCCTAGCCAGAAGATTGTAAGGTGTGCTGAAAGTGATCCTCACCTATTTTCTTGCAACTTCTCAAAAGGAAATTTGAAGCAATATTTGCAGGTGTCGGAGATATTCAACTTTTCGCAGGATGATTTGATGACTGAAGATATTTTCATCTTATATTGTCACTCTGAAATCTTTGTCTGGGTTGGGCAGCAGGTTGACCCCAAGAGTCGAATGCAGGCTCTAACAATTGGTGAGAAATTTCTTGAGCACGATTTTCTTTTAGAAAAGGTGTCTCATGACACTCCGATATACATTGTCATGGAAGGGAGTGAGCCTCCTTTCTTCACTCGTTTCTTCGCTTGGGAGTCTGCAAAATCTGCAATGCTGGGAAATTCGTTTCAGAGGAAACTCAAAATAGTAAAAAATGGGGGAACTCCAACTGTGGATAAACCCAAACGAAGAACGCCGGCATCTTATGGGGGAAGATCTAGCAGTGTACCAGATAAATCCCAGCGCTCACGCAGCATGTCTTTTAGTCCAGATCGTGTTCGTGTGCGGGGACGGTCTCCGGCCTTCAATGCCTTGGCAGCTACATTTGAGAACCCTAATGCCAGGAACCTTTCAACTCCACCCCCAGTGGGTAGGAAACTGTATCCCAAATCTGTGACCCCAGATTCAGCAAAATCGGCACCCAAATCCGCAGCCATAGCAGCTCTTAGTTCTAGCTTTGAACAGCCACCTTCAGCTCGAGATAGTCTGATACCCCGGTCAATCAAAGTGAATCAGAGTCCAGAGGCTCCAAAACCTAAGCCTGAGACAAACAACAATAAGGAGAATTCGATGACCACCAGAATAGAATCTCAAACCATAACGGAAGATGTGAAAGAAGGTGAAGTTGAAGATGAGGAAGGTCTTCCAATTTACCCATATGAACGCCTCAAAATATCATCTACAAGTCCTGTAACAGACATTGATGTGACTAAGCGAGAGACTTACCTATCATCTGCCGAGTTCAAAGAGAAATTTGGGATGACTAAAGATGCCTTTTACAAGTTGCCAAAATGGAAACAGAATAAATTCAAGATGGCCTTTAGGTTGCAGAGTGGAATTGAACATATGAAAGTTAAAGGGACAGCATCAGTGTTTTTTTCAGCATAG 2961 0.4269 MAVSMRDLDSSFQGAGQKAGLEIWRIENFNPVPIPKSSYGKFFTGDSYVILKTTASKSGALRHDIHYWLGKDTSQDEAGAAAVKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGVASGFKHVEDEEYKIRMFVCKGKHVVHVKEVPFARSSLNHDDIFILDTKSKIFQFNGSNSSIQERAKALEVVQYIKDTHHDGKCEVAAIEDGKLMADPETGEFWGFFGGFAPLPRKPASDDDQHVDTHPPMLLSIEKGVAEPVKNESLTRELLDTNKCYILDCGLEVFVWMGRNTSLDERKSASGAADELVSGSDRQKSQIIRVIEGFETVMFKSKFDSWPETTEVTVSEDGRGKVAALLKRQGVNVRGLLKADPVKEEPQPYIDCTGNLQVWRVNGQEKILLPASDQSKLYSGDCYIFQYTYPGDDKEEYLIGTWIGKTSVEEERASAISLASKMVESLKFLPSQTRIYEGNEPIQFYTIFQSLIVFKGGLSNGYKNYIAEKEIPDDTYSEDGVALFRIQGSGPDNMQAIQVEPVASSLNSSYCYILHNGSAVFTWIGNLTTSDVQELVERMLDLIKPNLQSKPQKEGSESEQFWDLLGGKSEYPSQKIVRCAESDPHLFSCNFSKGNLKQYLQVSEIFNFSQDDLMTEDIFILYCHSEIFVWVGQQVDPKSRMQALTIGEKFLEHDFLLEKVSHDTPIYIVMEGSEPPFFTRFFAWESAKSAMLGNSFQRKLKIVKNGGTPTVDKPKRRTPASYGGRSSSVPDKSQRSRSMSFSPDRVRVRGRSPAFNALAATFENPNARNLSTPPPVGRKLYPKSVTPDSAKSAPKSAAIAALSSSFEQPPSARDSLIPRSIKVNQSPEAPKPKPETNNNKENSMTTRIESQTITEDVKEGEVEDEEGLPIYPYERLKISSTSPVTDIDVTKRETYLSSAEFKEKFGMTKDAFYKLPKWKQNKFKMAFRLQSGIEHMKVKGTASVFFSA 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1220 986 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 254 427 IPR036180 -
Acco04g1220 986 SUPERFAMILY Actin depolymerizing proteins 129 243 - -
Acco04g1220 986 MobiDBLite consensus disorder prediction 868 883 - -
Acco04g1220 986 FunFam Villin-like 1 613 738 - -
Acco04g1220 986 MobiDBLite consensus disorder prediction 759 779 - -
Acco04g1220 986 CDD gelsolin_S5_like 517 608 - -
Acco04g1220 986 ProSiteProfiles Headpiece (HP) domain profile. 903 968 IPR003128 GO:0003779|GO:0007010
Acco04g1220 986 FunFam Gelsolin 6 131 - -
Acco04g1220 986 MobiDBLite consensus disorder prediction 803 830 - -
Acco04g1220 986 CDD gelsolin_S1_like 12 124 - -
Acco04g1220 986 Gene3D Severin 7 132 IPR029006 -
Acco04g1220 986 SUPERFAMILY VHP, Villin headpiece domain 892 967 IPR036886 GO:0003779|GO:0007010
Acco04g1220 986 FunFam Villin-4 248 354 - -
Acco04g1220 986 Pfam Villin headpiece domain 933 967 IPR003128 GO:0003779|GO:0007010
Acco04g1220 986 PANTHER VILLIN 8 958 IPR007122 GO:0051015
Acco04g1220 986 SUPERFAMILY Actin depolymerizing proteins 382 528 - -
Acco04g1220 986 Gene3D Severin 522 612 IPR029006 -
Acco04g1220 986 CDD gelsolin_S4_like 386 486 - -
Acco04g1220 986 MobiDBLite consensus disorder prediction 742 786 - -
Acco04g1220 986 Gene3D Severin 133 247 IPR029006 -
Acco04g1220 986 SUPERFAMILY Actin depolymerizing proteins 595 720 - -
Acco04g1220 986 Gene3D Villin headpiece domain 906 967 IPR036886 GO:0003779|GO:0007010
Acco04g1220 986 Gene3D Severin 248 357 IPR029006 -
Acco04g1220 986 FunFam Villin-4 385 519 - -
Acco04g1220 986 CDD gelsolin_S2_like 140 223 - -
Acco04g1220 986 SMART VILL_6 519 606 IPR007122 GO:0051015
Acco04g1220 986 SMART VILL_6 19 117 IPR007122 GO:0051015
Acco04g1220 986 SMART VILL_6 252 344 IPR007122 GO:0051015
Acco04g1220 986 SMART VILL_6 137 234 IPR007122 GO:0051015
Acco04g1220 986 SMART VILL_6 622 723 IPR007122 GO:0051015
Acco04g1220 986 SMART VILL_6 392 489 IPR007122 GO:0051015
Acco04g1220 986 FunFam Villin-like 1 132 247 - -
Acco04g1220 986 FunFam Gelsolin 520 612 - -
Acco04g1220 986 SUPERFAMILY Actin depolymerizing proteins 511 612 - -
Acco04g1220 986 MobiDBLite consensus disorder prediction 860 883 - -
Acco04g1220 986 SUPERFAMILY Actin depolymerizing proteins 11 147 - -
Acco04g1220 986 CDD gelsolin_S3_like 257 343 - -
Acco04g1220 986 PRINTS Gelsolin family signature 677 696 IPR007122 GO:0051015
Acco04g1220 986 PRINTS Gelsolin family signature 436 454 IPR007122 GO:0051015
Acco04g1220 986 PRINTS Gelsolin family signature 592 611 IPR007122 GO:0051015
Acco04g1220 986 PRINTS Gelsolin family signature 411 427 IPR007122 GO:0051015
Acco04g1220 986 PRINTS Gelsolin family signature 323 344 IPR007122 GO:0051015
Acco04g1220 986 PRINTS Gelsolin family signature 469 489 IPR007122 GO:0051015
Acco04g1220 986 PRINTS Gelsolin family signature 532 552 IPR007122 GO:0051015
Acco04g1220 986 PRINTS Gelsolin family signature 648 670 IPR007122 GO:0051015
Acco04g1220 986 Gene3D Severin 387 521 IPR029006 -
Acco04g1220 986 Gene3D Severin 613 737 IPR029006 -
Acco04g1220 986 SMART VHP_1 933 968 IPR003128 GO:0003779|GO:0007010
Acco04g1220 986 CDD gelsolin_S6_like 621 723 - -
Acco04g1220 986 Pfam Gelsolin repeat 28 111 IPR007123 -
Acco04g1220 986 Pfam Gelsolin repeat 150 216 IPR007123 -
Acco04g1220 986 Pfam Gelsolin repeat 645 716 IPR007123 -
Acco04g1220 986 Pfam Gelsolin repeat 267 337 IPR007123 -
Acco04g1220 986 Pfam Gelsolin repeat 410 482 IPR007123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1220 Acco-ChrAcco04 12283493 12291828 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g1220 04 12283493 12291828 Acco13g0997 13 8065818 8067521 CCT
Acco13g1228 13 10693510 10700564 Acco04g1220 04 12283493 12291828 CCT
Acco04g1220 04 12283493 12291828 Acco04g1220 04 12283493 12291828 ECH