Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0821 ATGTCGAAGATGCTTCTCCACAGCTCTCATATCAGCTCATTTCACCGATGCATCACTTTCCCTGCCACTCGCTTCTCTGCCTCTGTTGCCCCCGTTTCTCTCCTCCATTTTCGAAGCCGCTTCTCCGTTTCGGTTTCTTCTCAATCGCACATTCGAAGCATCTGTCACTTTCAGTCCCGTAGAGACCTATCAGTTTGTGCCTTCGATTCTTCATCTTCAGAGACTAAGGACGAGGAAGAAGCTGCGGGGAAGGATGGAATCAATGATCAGTCTGTTAAAATTGCCGATGAGGATTATCCGACGGGGGAATTAGACTTTGAACCCATTACGGGGTGGAGAGGTTTTCTAGTCAAGCTTAAGATGCTGGTTGCTTTCCCTTGGGAGCGTGTTCGCAAGGGCAGCGTTCTCACAATGAAGTTGCGCGGCCAGATATCAGATCAAATAAAGAGTAGATTCTCTCGAGGATTGTCTCTACCTCAGATTTGTGAGAACTTTCTGAAAGCTGCATATGATCCCCGGATTTCTGGTGTCTACCTCCATATTGATATTTTGAATTGTGGGTGGGGTAAAGTAGAAGAAATTCGAAGGCACATACTGAACTTCAAACAGTCAGGAAAATTTGTTGTGGCTTACGTCCCTTCATGTCAGGAAAAAGAATACTACCTTGCTTGTGCTTGTGACGAGATATACGCCCCTCCAAGTGCCTATTTTTCTTTGTTTGGCTTGACTGTTCAAGCTTCATTCCTCAGGGGTGTTTTAGATAACATAGGAATTGAACCACAAGTGGAAAGGATTGGCAAATACAAAAGCGCTGGGGATCAACTGGCCCGCAGAACTATATCTGACGCAAACAGTGAGATGCTGACTGCATTGCTTGATAATATCTACACAAATTGGCTGGATAAAGTTTCATCTGCAAAAGGACAAAAACGAGAAGATATTGAGAACTTTATAAATGAAGGTGTCTATCAAGTAGACAAGCTGAAAGAAGAGGGCTTCATAACTAACATAATCTATGATGACGAGGTTATTTCCATGTTGAAAGAGAGACTTGGAGTGGAAACAGATGAAAATCTTCATATGGTGGATTACAGAAAGTATTCCAGAGTTAGGAAATGGACTGTTGGAATATCAGGGGGTAAAGACTTGATAGCTCTCATCCGAGCCTCAGGGAGTATTAGCCGTATTGAAGGTCCATTAAGTACGTCAGGCTCAGGGATTATTGGGGAGAAGTTTATTGAGAAGATTCGCAGTGTCAGAGAGTCCAAAAAATACAAGGCTGCTATTATCCGAATTGACAGTCCTGGAGGTGATGCTCTTGCCTCTGATCTGATGTGGAGAGAAATCAGACTTTTGGCTGCTTCAAAACCAGTCATTGCTTCAATGTCTGATGTGGCTGCAAGTGGAGGATATTATATGGCAATGGCAACCGGAACTATTGTTGCAGAAAACCTTACTTTAACTGGTTCAATTGGAGTGGTTACAGGAAAATTTAACCTGGGTAAACTGTACGAGAAGATTGGATTTAATAAAGAAATCATATCAAGGGGAAGATATGCTGAGCTGCTTGCGTCAGAACAACGCCCTTTTAGACCGGATGAAGCCAAGTTATTTGCCGACTCTGCACAGCATGCTTACAAGCAATTTCGAGATAAGGCGGCATTATCCAGATCCATGACTGTAGATAAGATGGAGGACGTTGCACAGGGGAGAGTTTGGACCGGTAAAGATGCAGCTGATCGTGGTTTGGTCGATGCTATCGGTGGGCTTTCTCGTGCAATTGCCATAGCGAAATCTAAGGCCAACATACCTCAAGACAAACAGGTAACAATTGTGGAGCTCTCGAGAACAGGGCCTTCTCTGCTAGAGGTCTTAAGTGGCATTGAGAGCACCCTGGCTGGAGCAGACAGAACGATGAAGGAGCTGTTACAAAGCTTGACACTTTCTGATGGGGTTCAAGCCAGGATGGATGGAATCATGTTTGAGAGATTGGAAGGATATGCTTACGCCAATCCCATATTGACATTGATTAAAGATTACCTTAGTTCCCTGTAG 2055 0.4404 MSKMLLHSSHISSFHRCITFPATRFSASVAPVSLLHFRSRFSVSVSSQSHIRSICHFQSRRDLSVCAFDSSSSETKDEEEAAGKDGINDQSVKIADEDYPTGELDFEPITGWRGFLVKLKMLVAFPWERVRKGSVLTMKLRGQISDQIKSRFSRGLSLPQICENFLKAAYDPRISGVYLHIDILNCGWGKVEEIRRHILNFKQSGKFVVAYVPSCQEKEYYLACACDEIYAPPSAYFSLFGLTVQASFLRGVLDNIGIEPQVERIGKYKSAGDQLARRTISDANSEMLTALLDNIYTNWLDKVSSAKGQKREDIENFINEGVYQVDKLKEEGFITNIIYDDEVISMLKERLGVETDENLHMVDYRKYSRVRKWTVGISGGKDLIALIRASGSISRIEGPLSTSGSGIIGEKFIEKIRSVRESKKYKAAIIRIDSPGGDALASDLMWREIRLLAASKPVIASMSDVAASGGYYMAMATGTIVAENLTLTGSIGVVTGKFNLGKLYEKIGFNKEIISRGRYAELLASEQRPFRPDEAKLFADSAQHAYKQFRDKAALSRSMTVDKMEDVAQGRVWTGKDAADRGLVDAIGGLSRAIAIAKSKANIPQDKQVTIVELSRTGPSLLEVLSGIESTLAGADRTMKELLQSLTLSDGVQARMDGIMFERLEGYAYANPILTLIKDYLSSL 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0821 684 NCBIfam signal peptide peptidase SppA 407 598 IPR004635 GO:0006508|GO:0008233
Acco13g0821 684 SUPERFAMILY ClpP/crotonase 408 589 IPR029045 -
Acco13g0821 684 CDD S49_SppA_67K_type 136 349 IPR047217 -
Acco13g0821 684 PANTHER PROTEASE 4 89 683 - -
Acco13g0821 684 SUPERFAMILY ClpP/crotonase 125 342 IPR029045 -
Acco13g0821 684 Gene3D - 133 369 - -
Acco13g0821 684 Gene3D - 528 654 - -
Acco13g0821 684 PIRSF Protease_4_SppA 65 684 IPR004634 GO:0006465|GO:0008233|GO:0016020
Acco13g0821 684 Gene3D - 379 527 - -
Acco13g0821 684 Pfam Peptidase family S49 201 353 IPR002142 GO:0006508|GO:0008233
Acco13g0821 684 Pfam Peptidase family S49 452 603 IPR002142 GO:0006508|GO:0008233
Acco13g0821 684 CDD S49_Sppa_N_C 384 598 IPR047272 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0821 Acco-ChrAcco13 6197844 6204894 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g2865 04 45210207 45218734 Acco13g0821 13 6197844 6204894 CCT