Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2865 ATGTGGAGGCTGTTTCTACACAGCTCTCGTCGTAGCTCCTTTCGGCGCTCCCTAGAATTTGGCGCAACTCTGTCCTCTCCTTCCTCCTTTTCTGCTCCTCTATCTCATTTCCCATCTCAATGCTTCCTCTACCTTTCTCTTTTGTCTCATACCCAATCTTTCCCGCCGTTTCAGTCTCCCGCTCCCCAGTCTCTTGTCGCCTTCCATTCTTCCTTCTCCTCTTCTTTCCTCTCAAAATCGAAACAAGAGTTGGAGTCCACGCCCGACGGTGGCATTAATAATCATAGTGCCAGATTTGCCGACGAGGACTATCCGACTGGCGACTTTGATTTTGCGCCCATTTCTGGGTGGAGAAATTTTCTTCTGAAGCTCAAGACGCTCATTGCATTCCCTTTGGAGGGTGTTCGCAAGGGAAGCGTTCTCACAATGAAGTTGCGGGGCCGGATATCTGATCAGCTCAAGGGTCCTTTCTCTCGAGGACTGTCTCTACCTCAAATTTGTGAGAACTTTTCAAAGGCAGCCTATGATCTTCGTATTTCTGGTATCTATCTCCATATTGATAATTTGAATTGTGGATGGGGTAAAGTTGAAGAAATTCGAAGGCAAATATTGAATTTCAAAAGATCTGGAAAGTTTGTTGTGGCTTATGTCCCTTCATGCCGAGAAAAAGAATATTATCTTGCATGTGCATGTGAAGAGATATATGCCCCTCCAAGTGCTTTTTTTTCATTGCTTGGATTCACCGTTCAAGCATCATTCCTTAGAGGTGTTTTTGATAACATAGGGATTGAACCACAAGTTGAAAGGATTGGGAAATACAAAAGTGCAGGGGATCAGCTAACCTGTAGAACCATGTCTGAAGAAACTTGCGAGATGATGACTGAACTGCTTGACAATATTTATACAAATTGGCTGGATAAAGTCTCTTCTTCAAGAGGAAAAAAGAGGGAAGAGATTGTGAATTTCATAAATGAAGGAATCTATCAAGTAGACAGGTTGAAAGAAGAAGGCTTCATTACGAACATAATGTATGAGGATGAGGTTATTGCTAGGTTGAAGGAGATACTTGAATTGAAAACAAATGAAAGTCTGCATATGGTGGATTACAGGAAATATTGTAGAGTTAGGAGATGGACTGTTGGAATATCAGGTGGTAAAGACTTGATAGCCATCATACGAGCCTCTGGGATTATTAGTCGTGTCAAGGGTCCATTGAGTGCATCTAGATCGGGTATTATTGCTGAGCAGTTCATTGAGAAGATTCGCAAAGTCAGAGAGTCCAAACAGTATAAGGCTGCTATTATCCGAATTGATAGTCCTGGTGGTGATGCCCTTGCTTCTGATTTAATGTGGAGAGAAATCAGACTTATGGCTGCCTCTAAACCAGTCATTGCCTCATTGTCTGATGTTGCAGCAAGTGGAGGTTATTACATGGCAATGGGAGCCGAGACTATTGTAGCAGAAAGTCTTACCTTAACTGGATCAATTGGAGTGTTCACAGGAAAATTTAACCTGGGGAAACTGTATGAGAAGATTGGCTTCAACAAGGAAATTATATCAAGGGGAAAATATGCTGAGGTCCTTGCTGCTGAGCAACGTCCTTATAGACCAGATGAAGCAGAGCTAGTTGCCAAGTTTGCACAGCATATTTATAAACAGTTTCGAGATAAGGCAGCTTTTTCTAGATCAATGACTGTAGAAAGGATGGAGGAGGTTGCACAGGGGAGAGTTTGGACTGGTAAAGCCGCAGCTTCACATGGTTTAGTTGATGCTATTGGTGGGCTTTCTAGAGCTGTTGCCATAGCAAAATTGAAGGCTAATATACCTCAAGACAGACAGGTCACTCTTGTGGAACTTTGCCGACCTTCTCTTCGAGAGATTTTAAGTGGCGCAGGGAATGCCCTAGTTGAAGTAGATAACACATTGAAGGAACTGCTTCAGGAGTTGACATTTTCTGATGGAGTTCAAGCCCGGATGGATGGAATCATGCTTGAGAGACTGGAAGGATATCCTCACCCCAAGCCCATTTTGAGGCTGATGGAGGAGTTCCTTAGTTCCCTGTAG 2064 0.4327 MWRLFLHSSRRSSFRRSLEFGATLSSPSSFSAPLSHFPSQCFLYLSLLSHTQSFPPFQSPAPQSLVAFHSSFSSSFLSKSKQELESTPDGGINNHSARFADEDYPTGDFDFAPISGWRNFLLKLKTLIAFPLEGVRKGSVLTMKLRGRISDQLKGPFSRGLSLPQICENFSKAAYDLRISGIYLHIDNLNCGWGKVEEIRRQILNFKRSGKFVVAYVPSCREKEYYLACACEEIYAPPSAFFSLLGFTVQASFLRGVFDNIGIEPQVERIGKYKSAGDQLTCRTMSEETCEMMTELLDNIYTNWLDKVSSSRGKKREEIVNFINEGIYQVDRLKEEGFITNIMYEDEVIARLKEILELKTNESLHMVDYRKYCRVRRWTVGISGGKDLIAIIRASGIISRVKGPLSASRSGIIAEQFIEKIRKVRESKQYKAAIIRIDSPGGDALASDLMWREIRLMAASKPVIASLSDVAASGGYYMAMGAETIVAESLTLTGSIGVFTGKFNLGKLYEKIGFNKEIISRGKYAEVLAAEQRPYRPDEAELVAKFAQHIYKQFRDKAAFSRSMTVERMEEVAQGRVWTGKAAASHGLVDAIGGLSRAVAIAKLKANIPQDRQVTLVELCRPSLREILSGAGNALVEVDNTLKELLQELTFSDGVQARMDGIMLERLEGYPHPKPILRLMEEFLSSL 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2865 687 SUPERFAMILY ClpP/crotonase 135 345 IPR029045 -
Acco04g2865 687 NCBIfam signal peptide peptidase SppA 389 602 IPR004635 GO:0006508|GO:0008233
Acco04g2865 687 Pfam Peptidase family S49 458 607 IPR002142 GO:0006508|GO:0008233
Acco04g2865 687 Pfam Peptidase family S49 206 357 IPR002142 GO:0006508|GO:0008233
Acco04g2865 687 SUPERFAMILY ClpP/crotonase 382 594 IPR029045 -
Acco04g2865 687 CDD S49_Sppa_N_C 389 603 IPR047272 -
Acco04g2865 687 Gene3D - 138 276 - -
Acco04g2865 687 Gene3D - 277 374 - -
Acco04g2865 687 Gene3D - 530 655 - -
Acco04g2865 687 CDD S49_SppA_67K_type 141 354 IPR047217 -
Acco04g2865 687 Gene3D - 384 529 - -
Acco04g2865 687 PANTHER PROTEASE 4 97 686 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2865 Acco-ChrAcco04 45210207 45218734 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g2865 04 45210207 45218734 Acco13g0821 13 6197844 6204894 CCT
Acco04g2865 04 45210207 45218734 Acco04g2865 04 45210207 45218734 ECH