Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0620 ATGCCAGGAATCCTTACAAATGAATTTGAACATAATGAAAGAGCAAATGAGATGAACGGAAATCCCTCCCCTTGTAAGGAATCTGCTACTCCAATCAAGCCCCAAAGGAGTTCCTTGAATCCACAAAGACCTCAGAACACAGGTCCAGATGTACCTGCCTTACCGGTTGACACCTCAATCGAGCAGCTTTATGAAAATGTCTGTGACATGGAAAGTTCTGATCACTCACCTTCCAGACAAAGTCTCGGATCCGACGGCGATGAGTCTAGGATCGATTCAGAATTGTGCCATCTAGTTGGAGGACCGATGAGGGAAGTGGAAATCATGGAAGAGGAAGTGGCAGAGAGTTCGAGAGGTGATTCCATTAGTGAAACATCTTCTGGAAAAGAAACATCGGTGAATGCTGAGAAGCTGGAACAGGCAGATGAGAACATTCAACATGAGAAGTTGGTACCGGCCGATGAGAAGATTCAATCTGAGAAGTTGGCACAGGAGGATGAGAAGATTCAGTCTGGGAATTTGGTACAGGCGGATGAGAAGGTTCAATCTGCTAGTACAAGTTCTGCTTCTTCAGAAAATTCAAATCAAGTATCAAACTCACAGGTGGACCGCATCCCTGAAACACCACCAGAGTCAAAACCCAAGGTAAAAAGTCCTCCCACAAAGCCTCCCACTGATAAGAGGAATGATAAACCTCGGAGAAAACAAAATAATGGAGCAGCTCGTGGGAAAAAATTGAAGAACTCTCCTATTAGAAGGTTAAAGTCACAAAATCAGCGCGAGAATTCCACTGAATCTACATCAGACAAGCCAGAGATGGGGCCAGTTTTACTAAAGCAAGCAAGAGATATGATTTCAACGGGAGAAAATCCAAGGCTGGCTCTTGAATTAGCTCTTCGAGCAATGAGATTGTTTGAGAAGTATGCTGATGGAGAACCTAGTTTGGAACTGGTTATGTGCCTGCATGTTACCGCAGCAATATATTCCGGCTTGGGCCAGTACCATGAGGCAATCCCACTTCTTGAGCACTCCATTGGAATTCCTCTCATTGAGGAAGGCCAAGATCATGCCCTCGCCAAGTTTGCTGGTCACATGCAATTAGGTGACACCTATGCAATGTTGGGCCAGCTTGAAAATTCGATCATGTGCTACACCACAGGTTTGGAAGTCCAGAGGCAGGTCTTAGGAGAAACAGATCCAAGATTTGGTGAAACTTGCAGATATGTGGCTGAAGCACACGTTCAGGCGTTGCAATTTGATGAAGCTGAGAGGCTCTGCCAAATGGCTCTTGACATTCATAGAGCAAACGGTTCGCCTCCTTCTCTTGAAGAGGCGACTGATAGGAGGCTCATGGGACTCATATGTGAAACAAAAGGAAACCATGAAGCAGCTCTTGAGCATCTAATTTTAGCCAGCATGGCAATGGTGGCTAATGGCCAGGAAGTTGAAGTGGCATCTGTTGACAGCAGCATTGGAGACACATACTTATCTTTGTCCCGGTATGATGAAGCTATTTTTGCATATCAGAAAGCACTCACAGTTTTTAAGACCAGCAAAGGAGAGAATCATCCGGCCGTGGGATCAATCTTTGTACGCCTGGCTGACTTGCATAACAGGACAGGGAAGATAAGGGAATCAAAATCTTACTGCGAGAGTGCACTTAGAATCCATGAGAAACCCATGCCTGGGGTTCCTCCTGAGGAGATTGCAAGTGGTCTTATGGATATTTCAGCTATCTATGAGTCAATGAATGAGCTTGACCAGGCACTCAAGTTACTTCCCAAGGCACTGGAGATATATAAGGATGCCCCTGGTCGGCAAAGCACGATAGCAGGGATTGAAGCTCAGATGGGAGTATTGCACTACATGTTGGGAAGCTATTCTGAATCTTACAACACTCTGAAGAATGCCATCTCGAAGCTTCGTGCTGCTGGAGAGAAGAAAACAGCTTTCTTTGCCATCGCTCTTAACCAAATGGGACTTGCTTGTGTGCAGCGCTATGCATTAGGTGAGGCCACAGAACTGTTTGAAGAAGCAAAGAATATAATGGAACAAGAATATGGACCCTATCACCATGAAACGCTTGGGGTGTATAGCAATCTTGCTGGCACCTATGACGCAATAGGCAGGGTGGATGAGGCAATTCAGATTCTGGAGTATGTAGTGGGAATGAGAGAGGAAAAACTTGGGACAGCGAATCCTGATGTGGATGATGAGAAAAGAAGGCTGAGTGAATTGTTGAAGGAAGCTGGTAGAGTTAGGAGCAGAGCAGCCAGATCACTTGAGAACCTTCTTGATGCTAATGCTCCTTCTCAAAACACAGTAACTTAG 2331 0.4539 MPGILTNEFEHNERANEMNGNPSPCKESATPIKPQRSSLNPQRPQNTGPDVPALPVDTSIEQLYENVCDMESSDHSPSRQSLGSDGDESRIDSELCHLVGGPMREVEIMEEEVAESSRGDSISETSSGKETSVNAEKLEQADENIQHEKLVPADEKIQSEKLAQEDEKIQSGNLVQADEKVQSASTSSASSENSNQVSNSQVDRIPETPPESKPKVKSPPTKPPTDKRNDKPRRKQNNGAARGKKLKNSPIRRLKSQNQRENSTESTSDKPEMGPVLLKQARDMISTGENPRLALELALRAMRLFEKYADGEPSLELVMCLHVTAAIYSGLGQYHEAIPLLEHSIGIPLIEEGQDHALAKFAGHMQLGDTYAMLGQLENSIMCYTTGLEVQRQVLGETDPRFGETCRYVAEAHVQALQFDEAERLCQMALDIHRANGSPPSLEEATDRRLMGLICETKGNHEAALEHLILASMAMVANGQEVEVASVDSSIGDTYLSLSRYDEAIFAYQKALTVFKTSKGENHPAVGSIFVRLADLHNRTGKIRESKSYCESALRIHEKPMPGVPPEEIASGLMDISAIYESMNELDQALKLLPKALEIYKDAPGRQSTIAGIEAQMGVLHYMLGSYSESYNTLKNAISKLRAAGEKKTAFFAIALNQMGLACVQRYALGEATELFEEAKNIMEQEYGPYHHETLGVYSNLAGTYDAIGRVDEAIQILEYVVGMREEKLGTANPDVDDEKRRLSELLKEAGRVRSRAARSLENLLDANAPSQNTVT 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0620 776 Coils Coil 776 776 - -
Acco13g0620 776 MobiDBLite consensus disorder prediction 65 84 - -
Acco13g0620 776 Pfam Tetratricopeptide repeat 653 721 - -
Acco13g0620 776 Pfam Tetratricopeptide repeat 484 559 - -
Acco13g0620 776 SUPERFAMILY TPR-like 364 721 IPR011990 GO:0005515
Acco13g0620 776 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 51 768 - -
Acco13g0620 776 Pfam Tetratricopeptide repeat 573 606 - -
Acco13g0620 776 ProSiteProfiles TPR repeat profile. 485 518 IPR019734 GO:0005515
Acco13g0620 776 Gene3D Tetratricopeptide repeat domain 472 646 IPR011990 GO:0005515
Acco13g0620 776 MobiDBLite consensus disorder prediction 252 270 - -
Acco13g0620 776 MobiDBLite consensus disorder prediction 119 134 - -
Acco13g0620 776 Coils Coil 736 756 - -
Acco13g0620 776 Gene3D Tetratricopeptide repeat domain 276 471 IPR011990 GO:0005515
Acco13g0620 776 MobiDBLite consensus disorder prediction 135 167 - -
Acco13g0620 776 SUPERFAMILY TPR-like 303 512 IPR011990 GO:0005515
Acco13g0620 776 MobiDBLite consensus disorder prediction 1 95 - -
Acco13g0620 776 SUPERFAMILY TPR-like 610 752 IPR011990 GO:0005515
Acco13g0620 776 MobiDBLite consensus disorder prediction 108 275 - -
Acco13g0620 776 Gene3D Tetratricopeptide repeat domain 647 774 IPR011990 GO:0005515
Acco13g0620 776 ProSiteProfiles TPR repeat profile. 570 603 IPR019734 GO:0005515
Acco13g0620 776 MobiDBLite consensus disorder prediction 169 206 - -
Acco13g0620 776 SMART tpr_5 527 560 IPR019734 GO:0005515
Acco13g0620 776 SMART tpr_5 361 394 IPR019734 GO:0005515
Acco13g0620 776 SMART tpr_5 570 603 IPR019734 GO:0005515
Acco13g0620 776 SMART tpr_5 403 436 IPR019734 GO:0005515
Acco13g0620 776 SMART tpr_5 653 686 IPR019734 GO:0005515
Acco13g0620 776 SMART tpr_5 695 728 IPR019734 GO:0005515
Acco13g0620 776 SMART tpr_5 611 644 IPR019734 GO:0005515
Acco13g0620 776 SMART tpr_5 485 518 IPR019734 GO:0005515
Acco13g0620 776 MobiDBLite consensus disorder prediction 220 237 - -
Acco13g0620 776 MobiDBLite consensus disorder prediction 16 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0620 Acco-ChrAcco13 4565245 4567793 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g2584 04 42718465 42721046 Acco13g0620 13 4565245 4567793 CCT
Acco04g2584 04 42718465 42721046 Acco13g0620 13 4565245 4567793 ECH
Acco13g0620 13 4565245 4567793 Acco13g0620 13 4565245 4567793 ECH