Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2584 ATGCCGAGAATGGCTGATAATGAAATTACTGATGAGGGGGAGGCAAATGAGAGGAATATAAATCCTTCCTCTTCTAACTCTAAGGAGGCCTCTGCCCCAATTGAGTCACAACATCCTGAGAGTACAGGTGTTGCTGGTGCTGTTGATACCTCTATTGACCAGCTTTATGAAAATGTGTATGACATGCAAAGTTCTGATCAGTCACCTTCGAGACAAAGTTTTGGGTCTGGTGGTGATGAGTCTAGGATTGATTCAGAATTGCATAATCTAGTTGGAGGGCAAATGAGGGAGTTGGAGATAATGGAAGAGGAAATGGAGGAAAAGCAAGGTGGTGAAGGAATTAGTGAAACATCTTCTAGAAAGGCTAGTTTGTCAAATGATAGGAAGGTGGATAATGTGGATGAGATTCAACCTGCAGGTACAAGTTCTGTCACTTCTGAAAGACCAAACAAACCATCCAATGCGAAATTACAATCCAAGACAGCATTAAAATCAAAACCCAATGTCAGAAGTCCTCTTGTGAAGCCTTCTTTTGAGAAAAAGAATGACAAGCCTTTGAAAAAACAAAGCATGGGAGTTGTTAGCTCGAAGAAATCACAAATTGCTCCTCCTGGAAGGTCATTGTCTCAGAGTCGTGCCAAGAATTTAGCTGGACCATTATCAGATAAGCCTGAGATGGGACCAATTTTGCTTAAGCAGGCAGCGGATCAGATGTCATCAGGGGATAATCCACATAAGGCTCTTGAGTTAGCTCTTCAAGCTACCGAAGTGTTTGAGAAGTATGCTGGTGAGAAACCAAGCTTGGAGCTTGTTATGTGCTTACATGTTGCTGCAGCAATATATTGTAGCTTGGGTCAATACAATGATGCAATTCCAGTTCTCCTGCGCTCTATTGCGATTCCTGATATTGAGGAAGGGGAGGACCATGCACTGGGTAAATTTGCTGGTCTGATGCAACTGGGTGACACCTATGCAATGCTGGGCCAGCTTGAGAATTCAATTACGTACTACACCAAAGGTTTGGAAGTCCAGAAACAGATTTTGGGGGAAACAGATCAGAGAGTTGGTGAAACTTGTCGGTATCTGGCTGAAGCTCATGTTCAAGCTTTGCAGTTTGATGAGGCTGAGAGGCTCTGCCATATGGCTTTGGACATTCATAAAGCGAGAGATTCACCTCCTTCTCTTGAAGAGGCAGCTGATAGGAGGCTCATGGGCCTTATATGTGAAACAATGGGAAAGCATGAAGCAGCACTTGAGCATCTTGTTTTAGCAAGCATGGCAATGGTAGCGAATGGACAAGAGGGGGAAGTGGCATCTGTCGATTGTAGTATTGGAGATACGTATCTGTCCTTGTCTCGATATGATGAGGCTGTTTTTGCTTATCAAAAAGCACTAACAGCGTTCAAGGTCAGCAAAGGAGAGAATCATCCAGCCATGGCTTTGGTTTTTGTACGTTTAGCTGACTTGTATAAGAGGACAGGGAAGATAAAGGAATCCAAATCTTACTGTGAGAATGCACTTAAGATCTATGAGCAGCCTCTTCCCGGGGTCCTTCTTGAGGATATTGCAAGTGGTCTCACTGATGTTGCTGCTATCTATGAGTCAACGAATGAACATGAACAGGCACTCAATTTACTGAAGAAGGCATTAGGTATATATAACAATGCCCCTGGTCAGCAAAGTACAATAGCAGGAATTGAAGCTCAGATGGGGGTATTGTACTACATTGTAGGGGACTATACAGAATCTTACAATGCATTTAAGAGTGCTATCACAAAGCTTCGTGCTATGGGAGAGAAGAAATCAGCCTTCTTTGGCATTGCTCTTAATCAAATGGGACTTTCCTGCGTGCAGCGTTACGCCCTCAGTGAGGCTGCAGAATTGTTTGAAGAGTCCAAGAGCATTTTGGAACAAGAGTATGGACCATATCACCCTGAAACACTTGGCGTATGTAGCAATCTTGCCAGCACATATGATGCACTTGGCAGGTTAGATGATGCAATTGAAATTCTGGAGTACGTTGTTAGTTTAAGGGAGGAAAAACTTGGGACTGCAAATCCTGATGTTTATGATGAGAAGAGAAGATTGAGTGAATTGTTAAAGGAAGCAGGTAGAGTTCGAAACAGAAAATCAGTATCACTGGAGCGCCTTCTGGATTCCAATGTTTATGCTCTAAACAATTTTGTCATGAGGATGGCTAGCTAG 2205 0.4308 MPRMADNEITDEGEANERNINPSSSNSKEASAPIESQHPESTGVAGAVDTSIDQLYENVYDMQSSDQSPSRQSFGSGGDESRIDSELHNLVGGQMRELEIMEEEMEEKQGGEGISETSSRKASLSNDRKVDNVDEIQPAGTSSVTSERPNKPSNAKLQSKTALKSKPNVRSPLVKPSFEKKNDKPLKKQSMGVVSSKKSQIAPPGRSLSQSRAKNLAGPLSDKPEMGPILLKQAADQMSSGDNPHKALELALQATEVFEKYAGEKPSLELVMCLHVAAAIYCSLGQYNDAIPVLLRSIAIPDIEEGEDHALGKFAGLMQLGDTYAMLGQLENSITYYTKGLEVQKQILGETDQRVGETCRYLAEAHVQALQFDEAERLCHMALDIHKARDSPPSLEEAADRRLMGLICETMGKHEAALEHLVLASMAMVANGQEGEVASVDCSIGDTYLSLSRYDEAVFAYQKALTAFKVSKGENHPAMALVFVRLADLYKRTGKIKESKSYCENALKIYEQPLPGVLLEDIASGLTDVAAIYESTNEHEQALNLLKKALGIYNNAPGQQSTIAGIEAQMGVLYYIVGDYTESYNAFKSAITKLRAMGEKKSAFFGIALNQMGLSCVQRYALSEAAELFEESKSILEQEYGPYHPETLGVCSNLASTYDALGRLDDAIEILEYVVSLREEKLGTANPDVYDEKRRLSELLKEAGRVRNRKSVSLERLLDSNVYALNNFVMRMAS 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2584 734 MobiDBLite consensus disorder prediction 136 166 - -
Acco04g2584 734 MobiDBLite consensus disorder prediction 56 79 - -
Acco04g2584 734 MobiDBLite consensus disorder prediction 1 15 - -
Acco04g2584 734 Gene3D Tetratricopeptide repeat domain 603 719 IPR011990 GO:0005515
Acco04g2584 734 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 38 721 - -
Acco04g2584 734 Pfam Tetratricopeptide repeat 437 512 - -
Acco04g2584 734 Pfam Tetratricopeptide repeat 607 679 - -
Acco04g2584 734 SUPERFAMILY TPR-like 269 419 IPR011990 GO:0005515
Acco04g2584 734 SUPERFAMILY TPR-like 442 678 IPR011990 GO:0005515
Acco04g2584 734 MobiDBLite consensus disorder prediction 16 48 - -
Acco04g2584 734 SMART tpr_5 523 556 IPR019734 GO:0005515
Acco04g2584 734 SMART tpr_5 398 431 IPR019734 GO:0005515
Acco04g2584 734 SMART tpr_5 271 304 IPR019734 GO:0005515
Acco04g2584 734 SMART tpr_5 648 681 IPR019734 GO:0005515
Acco04g2584 734 SMART tpr_5 606 639 IPR019734 GO:0005515
Acco04g2584 734 SMART tpr_5 564 597 IPR019734 GO:0005515
Acco04g2584 734 SMART tpr_5 480 513 IPR019734 GO:0005515
Acco04g2584 734 SMART tpr_5 438 471 IPR019734 GO:0005515
Acco04g2584 734 SMART tpr_5 314 347 IPR019734 GO:0005515
Acco04g2584 734 SMART tpr_5 356 389 IPR019734 GO:0005515
Acco04g2584 734 Gene3D Tetratricopeptide repeat domain 421 602 IPR011990 GO:0005515
Acco04g2584 734 MobiDBLite consensus disorder prediction 1 225 - -
Acco04g2584 734 Pfam Tetratricopeptide repeat 317 345 IPR019734 GO:0005515
Acco04g2584 734 Gene3D Tetratricopeptide repeat domain 212 398 IPR011990 GO:0005515
Acco04g2584 734 ProSiteProfiles TPR repeat profile. 438 471 IPR019734 GO:0005515
Acco04g2584 734 MobiDBLite consensus disorder prediction 192 216 - -
Acco04g2584 734 MobiDBLite consensus disorder prediction 97 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2584 Acco-ChrAcco04 42718465 42721046 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g2584 04 42718465 42721046 Acco13g0620 13 4565245 4567793 CCT
Acco04g2584 04 42718465 42721046 Acco13g0620 13 4565245 4567793 ECH
Acco04g2584 04 42718465 42721046 Acco04g2584 04 42718465 42721046 ECH