Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0601 ATGCAATCTTTAGGTTATAAGGCTCTCGTGAATTTGCGCATGCCCGGTTACGGAGGGTCTGATTTTTGCGATACCGAGACCCGAGTAAGGGGACATTGGGAGAATTGCAGGAACCTGAGGAGAACGAATCAAATCGTAGTTTGTATTGCAGATAGGGATGAGAATGGCAGAGGCGCGAGTCGGAGCGCGAGTCCGAGTTCGTTTCTGTCTCGGAGCCACACATATGCCCTTTTAAAGCAGCAAATGGAGCTAGCTGCGAAATCCGAGGACTACAAGGAAGCTGCGAGGATTCGTGATTCGATTAAATCATTTGAAGAGGAGGAGCCAGTTTTGCGTTTGCGGAGATTAATGAAAGAAGCAATTGCTGACGAGCGGTTTGTGGATGCAGCAAAATATCGTGATGAGCTTAAAGAAATTGGTCCACACGGTCTCTTAAAATGTTCAAGTAATGCAACAACCTTGGGAATCAGGGTTCAAGTTAAAAGTGTATATATAGAGGGTAGAAGTCAGCCTTCAAAGGGGCTTTACTTTTTTGCATACAGGATCAGAATTACGAACAACTCTGACCGCCCTGTTCAACTTCTTAGAAGGCATTGGATTATAACCGACGCAAATGGGAAGACAGAACATGTCTGGGGGATGGGGGTTGTTGGTGAACAGCCTGTAATGCTTCCCAGGGCTAGCTTTGAATACACTTCAGCATGTCCAATAAGCACACCAAATGGTAGAATGGAAGGTGACTTTGAGATGATACATGTTGATAGAATAGGCTCACCATCATTTAACGTGGCTATTGCTCCCTTCTCTCTCTCTCTACTTGGAGATGATGATGGTCATTATATTTGA 846 0.4492 MQSLGYKALVNLRMPGYGGSDFCDTETRVRGHWENCRNLRRTNQIVVCIADRDENGRGASRSASPSSFLSRSHTYALLKQQMELAAKSEDYKEAARIRDSIKSFEEEEPVLRLRRLMKEAIADERFVDAAKYRDELKEIGPHGLLKCSSNATTLGIRVQVKSVYIEGRSQPSKGLYFFAYRIRITNNSDRPVQLLRRHWIITDANGKTEHVWGMGVVGEQPVMLPRASFEYTSACPISTPNGRMEGDFEMIHVDRIGSPSFNVAIAPFSLSLLGDDDGHYI 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0601 281 ProSiteProfiles UVR domain profile. 107 142 IPR001943 GO:0005515
Acco13g0601 281 SUPERFAMILY C-terminal UvrC-binding domain of UvrB 74 106 IPR036876 -
Acco13g0601 281 ProSiteProfiles ApaG domain profile. 150 277 IPR007474 -
Acco13g0601 281 Gene3D ApaG domain 146 279 IPR036767 -
Acco13g0601 281 PANTHER OS05G0170800 PROTEIN 53 277 - -
Acco13g0601 281 ProSiteProfiles UVR domain profile. 72 107 IPR001943 GO:0005515
Acco13g0601 281 Pfam UvrB/uvrC motif 112 139 IPR001943 GO:0005515
Acco13g0601 281 Pfam UvrB/uvrC motif 78 106 IPR001943 GO:0005515
Acco13g0601 281 SUPERFAMILY ApaG-like 152 271 IPR036767 -
Acco13g0601 281 Pfam ApaG domain 168 251 IPR007474 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0601 Acco-ChrAcco13 4357646 4360017 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g2568 04 42583007 42585131 Acco13g0601 13 4357646 4360017 CCT
Acco13g0601 13 4357646 4360017 Acco13g0601 13 4357646 4360017 ECH