Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2568 ATGCATGTATCAAGCGTTCGGAGTTTCTTGGAATCGCAGGTTCTGGGTCCCGGAAGCTCGGGTTTCGGAGTGCGGTGGGTGGATTCCAGAAACATCAGAAGAAGAAATATGATCGCCATGGTTTGTGCTGCTGCGGAAAGGGATGGGAATAGTCCAAGAGAGGGTCGAAGGATGAATCAGAGTCCGAGCCAAAATCCGACGAGTTCGATTCCTTCTTTACCCCACTCCTATGCCCTCTTGAAGCAGCAATTGGAAGTAGCTGCGAAATGCGAGGATTACAAAGAAGCTGCAAGGATTCGAGATTCGCTAAAATTGTTCGAGGAGGAGGAGCCAGTTCTGCATCTGCGAAGATTGATGAAGGAAGCGATTGCTGATGAAAGGTTTGAGGATGCCGCTAGATACCGAGATGAGCTAAAAGATATTGTCCCTCACTCTCTATTAAAATGTTCCAGTGATGCCACAACCTTGGGAATAAGGGTTCAAGTTAGGAGTGCTTATATAGAGAGCAGAAGCCAAGCTTCGCAAGGGATATACTTCTTTGCATTCAGAATAAGACTTACCAATAATTCAGACCGCCCCATTCAACCTTTTAGAAGGCATTGGATTGTGACTGATGCTAATGGGAACACAGAGAACTTGTGGGGGATTGGAGATGTTGGTGAACAACCAGTTATACTTCCACGGACTAGTTTTGAGTACTCTTCAGGATACTCATTGCACACCCCAAGTGGTAGAATGGAAGGTGACTTTGAGATGATCTACATGGATAGAATAGGCTCATCCCCATCATTTAATGTGGCAATTGCTCCCTTTTCACTCTCTATTCTGGGAGATGATGACGGTTATACCATTTGA 855 0.455 MHVSSVRSFLESQVLGPGSSGFGVRWVDSRNIRRRNMIAMVCAAAERDGNSPREGRRMNQSPSQNPTSSIPSLPHSYALLKQQLEVAAKCEDYKEAARIRDSLKLFEEEEPVLHLRRLMKEAIADERFEDAARYRDELKDIVPHSLLKCSSDATTLGIRVQVRSAYIESRSQASQGIYFFAFRIRLTNNSDRPIQPFRRHWIVTDANGNTENLWGIGDVGEQPVILPRTSFEYSSGYSLHTPSGRMEGDFEMIYMDRIGSSPSFNVAIAPFSLSILGDDDGYTI 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2568 284 SUPERFAMILY ApaG-like 154 275 IPR036767 -
Acco04g2568 284 Gene3D ApaG domain 148 279 IPR036767 -
Acco04g2568 284 ProSiteProfiles UVR domain profile. 109 144 IPR001943 GO:0005515
Acco04g2568 284 Pfam ApaG domain 169 253 IPR007474 -
Acco04g2568 284 ProSiteProfiles ApaG domain profile. 152 280 IPR007474 -
Acco04g2568 284 PANTHER OS05G0170800 PROTEIN 33 280 - -
Acco04g2568 284 MobiDBLite consensus disorder prediction 45 72 - -
Acco04g2568 284 MobiDBLite consensus disorder prediction 55 72 - -
Acco04g2568 284 Pfam UvrB/uvrC motif 114 140 IPR001943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2568 Acco-ChrAcco04 42583007 42585131 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g2568 04 42583007 42585131 Acco13g0601 13 4357646 4360017 CCT
Acco04g2568 04 42583007 42585131 Acco04g2568 04 42583007 42585131 ECH