Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1724 ATGGCCGTTCACGCTCAATATCCTTCTCATATCCTCCTCCTTCACCACCACAACACCAGCAACCTTCAAGCAGATTATGAACAAGCTCTTCATCAATCTCACACGCCATTTACCACTCCAGATATTACTAAGACTCCACCGCCTGTTGTGAATTCTGTTTCTCTGCAATCTACTCAATTGCTCAACCACCACCATCATAATAGCCTATCCACCGGCCTCCGCTTATCCTCCTCCGTCCACCACCAACGAACACCTCAATTACCTCATCACAGCCAACAACAACAACAACAAGAACAAACATCTCAACATGCCTCTCCATCTCATCTCTCTACTTTATCAGTTTTTTCTTCTCAAGATTATCTTGTCTCCCAAATCAAGAGACAACGAGACGAAATTAACCAATACCTTCAAGCACAGGAAGCGGAATTGCATCGAACATTAGCGGAGAAAAGGCAGAGACATTGCCGAGGGCTTCTCACCGCGGCGGAAGAAGCCGTGGCTCGGCGGCTGAGGGAGAAAGACATGGAGGTGGAGACAGTCACGCGCATGAACGCTGAGTTAGAAGCACGCGCCGCTCAACTCAGCTCCGAAGCACAGCTTTGGCAGGCAAAGGCAAAAGCACACGAAGCAACCGCAGTTTCTTTGCAAGCCAAACTGCAACAGGCCATGATGAACGGTACGGCCCCTGAAAAGAGAGACGACGATGCGCTATCGTTGGCCGCCGGAGCCGACGACGCCGAGTCGTCTAACGTTGACCCGGACCGATTCGAACCGACCGGACCAAAATGCAGAGGGTGTGGCCGGCGGGTAGCTTCGGTGGTGGTATTGCCGTGTCGACATGTGTGCTTGTGCCCCAAATGTGACGTCCATTTCCGAGCATGTCCGGTTTGCCTTTCCTTCAAAGATTCAACCGTTGAGGTTTTTTTATCTTAG 933 0.508 MAVHAQYPSHILLLHHHNTSNLQADYEQALHQSHTPFTTPDITKTPPPVVNSVSLQSTQLLNHHHHNSLSTGLRLSSSVHHQRTPQLPHHSQQQQQQEQTSQHASPSHLSTLSVFSSQDYLVSQIKRQRDEINQYLQAQEAELHRTLAEKRQRHCRGLLTAAEEAVARRLREKDMEVETVTRMNAELEARAAQLSSEAQLWQAKAKAHEATAVSLQAKLQQAMMNGTAPEKRDDDALSLAAGADDAESSNVDPDRFEPTGPKCRGCGRRVASVVVLPCRHVCLCPKCDVHFRACPVCLSFKDSTVEVFLS 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1724 310 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 243 310 IPR013083 -
Acco12g1724 310 ProSiteProfiles Zinc finger RING-type profile. 263 297 IPR001841 -
Acco12g1724 310 Pfam Zinc finger, C3HC4 type (RING finger) 262 298 - -
Acco12g1724 310 PIRSF SBP1_RNase_bind 1 310 IPR017066 -
Acco12g1724 310 MobiDBLite consensus disorder prediction 64 108 - -
Acco12g1724 310 FunFam probable BOI-related E3 ubiquitin-protein ligase 2 245 309 - -
Acco12g1724 310 CDD mRING-HC-C3HC5_CGRF1-like 261 297 - -
Acco12g1724 310 Coils Coil 122 142 - -
Acco12g1724 310 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 79 307 IPR017066 -
Acco12g1724 310 Coils Coil 170 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1724 Acco-ChrAcco12 28415236 28416495 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1724 263 297 Miscellaneous Gene Families AT2G21380 40.000 9.17e-06 45.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g1903 11 33254541 33255875 Acco12g1724 12 28415236 28416495 CCT
Acco12g1724 12 28415236 28416495 Acco12g1724 12 28415236 28416495 ECH