Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1903 ATGGCCGTTCAAGCTCAATACCCATCCAATATTCTCCTCCTCAACAGAAATGAACAGGAAGGACATGATTATTCGTTGCAGCCACAATCAGGAGGGTTTCTTGATCAGTCCCATATCTTATTCAACAATGGAGGTACTAATAATTCTCGCAAGAGAGGAAGAGAAGCAACGATGGCCACCTGCGTCGATCAAACAGCTCATAACGCTGTTAATCCCTTCTCTTTGCAATCCCAGACTCCTCAGCTCGTAGAACTCTCTCAACTCCATAACCAACAACCAAATGTCGTCTCCACAGGCCTCCGATTATCATTCGGCGACCATCAACAGCAGCAGCAACAGAGACTACAATTACAGCAACAGCGCCAACAACAAGCCTATCAGCCCTATGCTTTCTTATCTTTATTGCCCGAAGGATTTGCCTCCCAAATCAAACAACAGCGTGATGAGATTGATCAATTTCTCCAAGCCCAGGGAGAACAATTGCGACGGGCATTAGCCGAGAAGAGACAGAGGCATTATCGTGCACTTCTAAGCGTGGCGGAAGAATCGGTGGTGCGGCGGTTGAGGGAGAAGGAGGTAGAGATGGAAAAAGCAACGCGCAGGAATGCCGAGTTAGAAGCGCGCGCGGCGCAACTTAGCGTGGAGGCACAGGTTTGGCAGGCAAAGGCAAAGGCACAGGAGGCAACGGCGGCGTCTCTGCAAGCGCAACTGCAACAGGCTATGATGAGCGGTGTTGCGCAGGATAAAGCAGGGTGTTTAGCGGAGGACGGGGGGCTATCCTGCGCGGTGGGTGGCGGTGAGGGCCAACCGGAGGACGCCGAATCAGCGTATATAGACCCGGACCGGGTTGTGGAATCGGGACCCAAATGCAGAGGGTGTGGGAAGCGAGTGGCATCGGTGGTGGCATTGCCGTGTCGGCACCTATGCATCTGCAGGGAATGCGACGCGCACTTCCGAGCGTGTCCTGTATGCCTCACACTCATAAATTCAACCGTTGAAGTCTTCCTCTCTTAG 1014 0.5256 MAVQAQYPSNILLLNRNEQEGHDYSLQPQSGGFLDQSHILFNNGGTNNSRKRGREATMATCVDQTAHNAVNPFSLQSQTPQLVELSQLHNQQPNVVSTGLRLSFGDHQQQQQQRLQLQQQRQQQAYQPYAFLSLLPEGFASQIKQQRDEIDQFLQAQGEQLRRALAEKRQRHYRALLSVAEESVVRRLREKEVEMEKATRRNAELEARAAQLSVEAQVWQAKAKAQEATAASLQAQLQQAMMSGVAQDKAGCLAEDGGLSCAVGGGEGQPEDAESAYIDPDRVVESGPKCRGCGKRVASVVALPCRHLCICRECDAHFRACPVCLTLINSTVEVFLS 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1903 337 ProSiteProfiles Zinc finger RING-type profile. 290 324 IPR001841 -
Acco11g1903 337 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 43 334 IPR017066 -
Acco11g1903 337 FunFam probable BOI-related E3 ubiquitin-protein ligase 2 272 336 - -
Acco11g1903 337 Pfam Zinc finger, C3HC4 type (RING finger) 289 330 - -
Acco11g1903 337 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 270 337 IPR013083 -
Acco11g1903 337 Coils Coil 181 243 - -
Acco11g1903 337 PIRSF SBP1_RNase_bind 1 337 IPR017066 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1903 Acco-ChrAcco11 33254541 33255875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1903 290 337 Miscellaneous Gene Families AT2G21380 35.417 1.32e-06 48.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g1903 11 33254541 33255875 Acco12g1724 12 28415236 28416495 CCT
Acco11g1903 11 33254541 33255875 Acco11g1903 11 33254541 33255875 ECH