Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1715 ATGTACAGAGATCGAGGAGCAGTTGGATCGAAATCGGAAGTTGGTTCCGTTGATCGGAAGCGAATCAATGACGTCCTGGACAAGCAGCTTGAGCGATCATCGCCGTCGACATCTAGGACTATCAACGGCAAGGATAGGTCGGCAACATCCGTGCTGACCGGTAAGCCACCCCCCGATCATCGGGACCCACGTTCAGCTCCCGTCTCAAAAAACACCAACGCTTCTGATGTAGAGGAATCTGAAACAGACAGTGAAGAGTCAGATGTTAGTGGTTCTGATGGAGATGACACATCTTGGATTTCATGGTTTTGCAATCTGAGAGGAAATGAATTCTTTTGTGAGGTTGATGATGATTACATCCAAGATGACTTCAACCTCTGCGGATTAAGCAGTCAAGTACCTTACTATGATTATGCGCTTGATTTAATTCTGGATGTTGAATCCTCCCACGGCGACATGTTCACAGAGGAACAAAATGAATTAATTGAATCAGCAGCAGAGATGCTATATGGCTTAATTCATGCCCGATACATCTTGACAAGCAAAGGAATGGCTGCCATGCTGGACAAGTACAAGAACTATGATTTTGGTAGATGCCCGAGAGTTTACTGCTCTGGACAACCCTGCCTTCCAGTTGGTCAGGCAGACCTTGCCCGGTCAAGTACTGTGAAAATATATTGCCCTCGGTGTGAAGATATTTACTATCCTCGGTCCAAGTATCAAGGCAACATCGATGGAGCTTATTTTGGGACTACGTTTCCTCATCTGTTCCTGATGACGTACGGACAGCTGAAGCCACAAAAACCATCTCAGAGCTATGTTCCAAGAGTTTTTGGTTTCAAAATTCACAAGCCTTGA 858 0.4557 MYRDRGAVGSKSEVGSVDRKRINDVLDKQLERSSPSTSRTINGKDRSATSVLTGKPPPDHRDPRSAPVSKNTNASDVEESETDSEESDVSGSDGDDTSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMFTEEQNELIESAAEMLYGLIHARYILTSKGMAAMLDKYKNYDFGRCPRVYCSGQPCLPVGQADLARSSTVKIYCPRCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYGQLKPQKPSQSYVPRVFGFKIHKP 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1715 285 Gene3D protein kinase ck2 holoenzyme, chain C, domain 1 91 195 IPR016149 GO:0005956|GO:0019887
Acco12g1715 285 Gene3D - 196 270 - -
Acco12g1715 285 PRINTS Casein kinase II regulatory subunit family signature 115 129 IPR000704 GO:0005956|GO:0019887
Acco12g1715 285 PRINTS Casein kinase II regulatory subunit family signature 170 191 IPR000704 GO:0005956|GO:0019887
Acco12g1715 285 PRINTS Casein kinase II regulatory subunit family signature 217 238 IPR000704 GO:0005956|GO:0019887
Acco12g1715 285 PRINTS Casein kinase II regulatory subunit family signature 98 114 IPR000704 GO:0005956|GO:0019887
Acco12g1715 285 PRINTS Casein kinase II regulatory subunit family signature 245 262 IPR000704 GO:0005956|GO:0019887
Acco12g1715 285 PRINTS Casein kinase II regulatory subunit family signature 195 216 IPR000704 GO:0005956|GO:0019887
Acco12g1715 285 PANTHER CASEIN KINASE II SUBUNIT BETA 77 284 IPR000704 GO:0005956|GO:0019887
Acco12g1715 285 SUPERFAMILY Casein kinase II beta subunit 96 284 IPR035991 GO:0005956|GO:0019887
Acco12g1715 285 Pfam Casein kinase II regulatory subunit 98 281 IPR000704 GO:0005956|GO:0019887
Acco12g1715 285 MobiDBLite consensus disorder prediction 14 28 - -
Acco12g1715 285 MobiDBLite consensus disorder prediction 78 92 - -
Acco12g1715 285 FunFam Casein kinase II subunit beta 196 270 - -
Acco12g1715 285 ProSitePatterns Casein kinase II regulatory subunit signature. 199 230 IPR000704 GO:0005956|GO:0019887
Acco12g1715 285 SMART CK_II_beta_2 98 281 IPR000704 GO:0005956|GO:0019887
Acco12g1715 285 MobiDBLite consensus disorder prediction 29 49 - -
Acco12g1715 285 FunFam Casein kinase II subunit beta 91 195 - -
Acco12g1715 285 MobiDBLite consensus disorder prediction 1 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1715 Acco-ChrAcco12 28287442 28290007 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g1891 11 33157563 33159367 Acco12g1715 12 28287442 28290007 CCT
Acco12g1715 12 28287442 28290007 Acco12g1715 12 28287442 28290007 ECH