Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1891 ATGTACAGAGAGCGAGCAAGTGTTGGATCCAAATCGGAGGTGAGTTCCGTTGATCGAAAGCGAATCAACGACGTTCTCGACAAGCAGCTTGAACGATCGTCGCCGTCCACTTCTAGGGCAATCAACGGCAAGGATAGGTCGGTGCAATCTGTATTGACGGGCAAGTCACCGGCTGATCACAAGGATTTTCGCTCTGCCTCCATATCTAAGAAATCTAACGTTTCAGATGTTGCAGAGGAATCTGAAACAGACAGTGAGGAGTCAGAAGTTAGTGGTTCGGATGGAGATGACACATCTTGGATTTCATGGTTCTGCAATCTAAGAGGAAATGAATTCTTTTGCGAGGTTGATGATGATTACATCCAAGACGATTTCAACCTCTGTGGATTAAGTAGTCAAGTTCCTTACTATGATTACGCTCTAGATTTAATTTTGGATGTTGAATCCTCCCATGGTGACATGTTCACGGAGGAGCAAAATGAGTTAATTGAATCAGCAGCAGAAATGCTTTATGGTCTTATTCATGCCCGTTACATTTTGACTGGCAGAGGAATGGCTGCTATGCTGGACAAGTACAAAAACTATGATTTTGGGAGATGCCCGAGAGTTTACTGCTCTGGACAACCCTGTCTTCCAGTTGGTCAGTCAGATATTGCTAGGTCAAGTACTGTGAAAATATACTGTCCTAGATGTGAAGATACTTACTATCCGCGGTCCAAGTATCAAGGCAACATTGATGGAGCTTATTTTGGAACTACATTTCCACACCTCTTCTTTATGACTTACGGACAGCTAAAGCCACAAAAGCCCTTGCAGAGCTATGTGCCAAGAGTCTTCGGCTTCAAAATTCATAAGCCATGA 861 0.4367 MYRERASVGSKSEVSSVDRKRINDVLDKQLERSSPSTSRAINGKDRSVQSVLTGKSPADHKDFRSASISKKSNVSDVAEESETDSEESEVSGSDGDDTSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMFTEEQNELIESAAEMLYGLIHARYILTGRGMAAMLDKYKNYDFGRCPRVYCSGQPCLPVGQSDIARSSTVKIYCPRCEDTYYPRSKYQGNIDGAYFGTTFPHLFFMTYGQLKPQKPLQSYVPRVFGFKIHKP 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1891 286 Gene3D - 197 271 - -
Acco11g1891 286 FunFam Casein kinase II subunit beta 197 271 - -
Acco11g1891 286 Pfam Casein kinase II regulatory subunit 99 282 IPR000704 GO:0005956|GO:0019887
Acco11g1891 286 Gene3D protein kinase ck2 holoenzyme, chain C, domain 1 92 196 IPR016149 GO:0005956|GO:0019887
Acco11g1891 286 PANTHER CASEIN KINASE II SUBUNIT BETA 78 285 IPR000704 GO:0005956|GO:0019887
Acco11g1891 286 MobiDBLite consensus disorder prediction 1 96 - -
Acco11g1891 286 ProSitePatterns Casein kinase II regulatory subunit signature. 200 231 IPR000704 GO:0005956|GO:0019887
Acco11g1891 286 MobiDBLite consensus disorder prediction 14 28 - -
Acco11g1891 286 FunFam Casein kinase II subunit beta 92 196 - -
Acco11g1891 286 MobiDBLite consensus disorder prediction 29 54 - -
Acco11g1891 286 MobiDBLite consensus disorder prediction 79 93 - -
Acco11g1891 286 PRINTS Casein kinase II regulatory subunit family signature 99 115 IPR000704 GO:0005956|GO:0019887
Acco11g1891 286 PRINTS Casein kinase II regulatory subunit family signature 218 239 IPR000704 GO:0005956|GO:0019887
Acco11g1891 286 PRINTS Casein kinase II regulatory subunit family signature 116 130 IPR000704 GO:0005956|GO:0019887
Acco11g1891 286 PRINTS Casein kinase II regulatory subunit family signature 246 263 IPR000704 GO:0005956|GO:0019887
Acco11g1891 286 PRINTS Casein kinase II regulatory subunit family signature 171 192 IPR000704 GO:0005956|GO:0019887
Acco11g1891 286 PRINTS Casein kinase II regulatory subunit family signature 196 217 IPR000704 GO:0005956|GO:0019887
Acco11g1891 286 SUPERFAMILY Casein kinase II beta subunit 97 285 IPR035991 GO:0005956|GO:0019887
Acco11g1891 286 SMART CK_II_beta_2 99 282 IPR000704 GO:0005956|GO:0019887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1891 Acco-ChrAcco11 33157563 33159367 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g1891 11 33157563 33159367 Acco12g1715 12 28287442 28290007 CCT
Acco12g1712 12 28254575 28258260 Acco11g1891 11 33157563 33159367 CCT
Acco11g1891 11 33157563 33159367 Acco11g1891 11 33157563 33159367 ECH