Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0285 ATGGCGAGAAGATCAGCGTCACTTCTTAAACAGCTTTTCACAACATTGGAATCATCGGACACTCCCAACATCATCTCCTCATGCTCGAGATTTACTCCCTCCCGATCCGTCACTTACATGCCCCGACCTGGGGATGGGACTCCACGCGCTGTGACCCTTATTCCCGGCGATGGAATTGGACCTCTTGTTACAGACGCTGTTGAGCAAGTGATGGAGGCGATGCACGCGCCAGTTTACTTTGAGAAGTATGATGTTCACGGTGACATGCCGAGAGTGCCTCCGGAGGTGATCGATTCGATCAAGAAGAATAAGGTTTGCTTGAAGGGTGGATTGGCTACACCCATGGGCGGTGGTGTGAGCTCCTTGAACGTGCAGCTAAGGAAAGAGCTTGATCTGTATGCTTCGCTCGTGAATTGCTTTAATCTTCCCGGCTTGGTGACGAGGCACGAGAATGTTGATATTGTCGTGATTAGGGAGAATACGGAGGGAGAGTATTCTGGCCTGGAACATGAGGTCGTTCCGGGAGTCGTTGAAAGCCTCAAGGTAATCACAAAGTTTTGCTCAGAGCGTATTGCTAAATATGCTTTTGAGTATGCTTATCTAAACAACAGAAAGAAAGTGACGGCCGTGCACAAAGCAAATATTATGAAGCTAGCAGATGGTTTATTCTTGGAATCCTGTCGAGAGGTTGCCACAAAGTACCCTGGAATCAAGTATAATGAAATTATTGTGGATAACTGCTGCATGCAGCTTGTTTCAAAGCCTGAGCAGTTTGATGTCATGGTAACCCCAAATCTTTATGGAAATCTAGTTTCAAATACAGCAGCAGGTATCGCTGGAGGCACTGGAGTAATGCCCGGAGGAAATGTGGGGGCTGATCACGCTGTGTTTGAGCAAGGTGCTTCAGCAGGAAATGTTGGTAATGATAAATTATTGGAGCAAAAGACAGCAAACCCATTAGCATTGCTTCTCTCATCAGCCATGATGCTCAGACATCTCCAGTTTCCCGCATTTGCTGATCGATTGGAAACCGCTGTGAAACGAGTCATTCTTGAGGGCAAACATTGGACAAAAGACCTCGGAGGGCAAAGCACCACCCAAGAGGTTGTTGATGCAGTGTTGAATGCTTTAGACTGA 1137 0.4714 MARRSASLLKQLFTTLESSDTPNIISSCSRFTPSRSVTYMPRPGDGTPRAVTLIPGDGIGPLVTDAVEQVMEAMHAPVYFEKYDVHGDMPRVPPEVIDSIKKNKVCLKGGLATPMGGGVSSLNVQLRKELDLYASLVNCFNLPGLVTRHENVDIVVIRENTEGEYSGLEHEVVPGVVESLKVITKFCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATKYPGIKYNEIIVDNCCMQLVSKPEQFDVMVTPNLYGNLVSNTAAGIAGGTGVMPGGNVGADHAVFEQGASAGNVGNDKLLEQKTANPLALLLSSAMMLRHLQFPAFADRLETAVKRVILEGKHWTKDLGGQSTTQEVVDAVLNALD 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0285 378 Gene3D Isopropylmalate Dehydrogenase 37 378 - -
Acco12g0285 378 NCBIfam isocitrate dehydrogenase (NAD(+)) 47 376 IPR004434 GO:0006099
Acco12g0285 378 SMART Iso_dh_2 50 373 IPR024084 -
Acco12g0285 378 FunFam Isocitrate dehydrogenase [NAD] regulatory subunit 1 38 377 - -
Acco12g0285 378 SUPERFAMILY Isocitrate/Isopropylmalate dehydrogenase-like 49 377 - -
Acco12g0285 378 Pfam Isocitrate/isopropylmalate dehydrogenase 51 373 IPR024084 -
Acco12g0285 378 PANTHER DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE 37 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0285 Acco-ChrAcco12 2484471 2488002 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g2449 11 37599791 37601872 Acco12g0285 12 2484471 2488002 CCT
Acco12g0285 12 2484471 2488002 Acco12g0285 12 2484471 2488002 ECH