Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g2449 ATGGCGAGAAGATGCGCACCACTCCTTAAACAAATCCTCACCAGATCACAATCGTTAGATCAGTGCCCGACGACCATCCTGACGTCATGCTCCAGCAGATTCAACCCGGAGCGATCCGTGACGTACATGCCCCGGCCCGGAGATGGGTCTACACGCACCGTCACCCTCATACGGGGAGATGGCATTGGGCCTCTGGTGACCGGAGCCGTGGAGCAAGTGATGGAGGCGATGCACGCGCCGGTGTACTTCGAGAAATATGAAGTGCGAGGGCGGATGGACAGAGTGCCACAGGAGGTGATGGATTCGATCAGGAGGAACAAAGTGTGCTTGAAGGGCGGTCTGGCCACGCCCATGGGCGGAGGAGTCAGCTCCTTGAACGTGCAGCTAAGGAAAGAGCTTGATCTCTACGCTTCCCTCGTTAATTGTTTCAATCTTCCCGGGATCACCACAAGGCATCACAATGTCGATATCGTTGTCATCAGAGAGAACACCGAGGGCGAGTACGCCGGTTTGGAGCACGAGGTTGTCCCCGGCGTTGTCGAAAGTCTCAAGGTAATAACAAAGTTCTGTTCAGACCGTATTGCTAGATATGCTTTCGAGTATGCTTACCTGAATAACAGAAAGAAGGTAACTGCGGTGCACAAAGCAAACATCATGAAGCTGGCAGACGGCTTGTTTTTGGAATCTTGCAGAGAGGTCGCCAGCTCTTATCCTGCAATCCAATATAACGAAATAATTGTGGATAACTGTTGCATGCAACTTGTTTCAAAACCTGAGCAGTTTGATGTTATGGTAACGCCGAATCTGTATGGGAATCTAGTGGCGAACACGGCAGCAGGAATTGCAGGGGGCACGGGAGTGATGCCGGGAGGGAATGTCGGGGCAGAGCATGCGGTGTTTGAGCAAGGTGCTTCGGCGGGGAATGTGGGGAATGAGAAGCTGGTGGAGGAGAAGACGGCGAACCCGGTGGCGCTGCTGCTGTCATCGGCCATGATGCTGCGGCATCTGCAGTTTCCGGCGTTTGCTGACCGATTGGAGGATGCGGTGATGGCAGTGATACTGGAGGGGAAGCACTGCTCTAAAGACCTGGGAGGTTCCAGCACCACCCAAGAGATTGTTGACGCCGTCATAGCTGCCTTGCAATGA 1146 0.5375 MARRCAPLLKQILTRSQSLDQCPTTILTSCSSRFNPERSVTYMPRPGDGSTRTVTLIRGDGIGPLVTGAVEQVMEAMHAPVYFEKYEVRGRMDRVPQEVMDSIRRNKVCLKGGLATPMGGGVSSLNVQLRKELDLYASLVNCFNLPGITTRHHNVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSDRIARYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVASSYPAIQYNEIIVDNCCMQLVSKPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGAEHAVFEQGASAGNVGNEKLVEEKTANPVALLLSSAMMLRHLQFPAFADRLEDAVMAVILEGKHCSKDLGGSSTTQEIVDAVIAALQ 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g2449 381 SMART Iso_dh_2 53 376 IPR024084 -
Acco11g2449 381 Gene3D Isopropylmalate Dehydrogenase 39 380 - -
Acco11g2449 381 FunFam Isocitrate dehydrogenase [NAD] regulatory subunit 1 41 380 - -
Acco11g2449 381 Pfam Isocitrate/isopropylmalate dehydrogenase 53 376 IPR024084 -
Acco11g2449 381 SUPERFAMILY Isocitrate/Isopropylmalate dehydrogenase-like 50 380 - -
Acco11g2449 381 PANTHER DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE 39 380 - -
Acco11g2449 381 NCBIfam isocitrate dehydrogenase (NAD(+)) 50 379 IPR004434 GO:0006099
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g2449 Acco-ChrAcco11 37599791 37601872 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g2449 11 37599791 37601872 Acco12g0285 12 2484471 2488002 CCT
Acco11g2449 11 37599791 37601872 Acco11g2449 11 37599791 37601872 ECH