Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2325 ATGGCAGTAAAGGCCAAGAAGAAGATGGAGAATGAAGTGGGTTGTGGTTTCATGGGGAGGATTTTCCATCTCACAAGCTACATGCTCAGGAAGTCATCTGTTCATTCACTACCCACGAAGGTGAACGATCAGAGCAAAACTGAATCCAAGAAGCCGCCAAATCTTGAATCCATGGCTACTTCAACTCAGTCGCACAAACCATCCAGGAAGAGCCCTTCTGATCATCGAACACCTCCTCCCATCAAGAATAAAAATCCGAGACCTTCGGACGCTGCAAGAAGCTCAACATCATCCTGTGCCAATTCATTACAAACTAAGATTCAACAAAACCACAAGTTGAATAACAATAGCAGAACACAGAGGCAGCCTACTGAAAACTCGTTGGTGCTTGCCAGGGAAAGCACTCATTACCAGAAAGAAAACGAGAATAAATCCCCCCTCAAACTTACTGGTAATTTGGTTGTAAATACCAGCCCAAGAACTAGAACTAGGACTCGTGAAAGTGTTCCCAAGAATAGAGATGTGATGAACTCATCACTCAAGTATCACACTAACACAAGTGTAACGGGGAATATTATGAGGAAGAGCACTGATGAGCTTGCCCAGTTTCGGAGTCCCAAGAACAGAGTAGACCCAGAAGTGTTGAAAACAATGGGAAATGAAGCATATAAGCAAGGAAGATTTGAAGAGGCTTTGTCTTTATATGAGCGAGCGATTGCTATTGATTCAAATAAGGCAACGTTTCATTGCAATAAGAGTGCGGCTTTGATGGGATTAGACCGTCTTCTGGAAGCAATTGTTGAGTGCCAGGAAGCTATCCGGCTGGAACCTTCTTATAACAGACCCCACCACCGTTTGGCAACCATATATCTCAGATTGGGAGAAGCAGAGAAGGCACTAAGTTACAATGTCGCAACCCCATATTCTGATTCTGCACTCGCCTTCCAAGCTCAGTCTCTTCGCAACCACCTTCAAAAATGCATTGAAGCAAGGAAAAGCAATGATTGGAATGCTATACTGAAGGAAACGCAATCTGCCATATCATTAGGTGCTGATTCAAGTCCTCAGGTTTATGCGTTGCAAACAGAAGCCTTACTTAAGCTCTTCAGACATCAGGAGGCATATGCTACCTACGAGAAAATGCCCAAATTTGCTATCAATTGGTGCACCAAGTTGTTCGGTCTGGCTCGTTGTGCTTATCTGTTTATGATAGGCGCGCAGGCTTACTTGGCTGTTGGCAGGTTCGAGGATGCAGTGACGGCAGCTGAGCAAGCAGCTAAACTTGATCCGAGTGACAAAGAGGTGAGTACAGTGGTAAAGAGGGCAAGAGCAATATCATCGGCCAGAATGAGTGGAAACTTACTGTTCAAGGCAACCAAATACACGGAAGCATGTGCTTTATACAACGAAGGACTAGAGCACGATCCATACAACTCAGTCCTGCTCTGCAACAGAGCAGCATGTCGTTCTAAGCTGGGCTTCTTTGAGAAAGCCATTGAAGATTGTAATGCTGCCCTTGCCGTTCAGCCTAGTTATAGCAAGGCACGGTTAAGGAGGGCATATTGCAATGCCAAGTTGGAAAGATGGGAAGCTGCAATTCAAGACTATGAAATGCTACTGAGAGAGAAGCCAGGGGATGAGGAGGTGGGTAGGGCTCTGTTTGAGGCTCAGCTTCAGCTCAAGATGCTGCGTGGGGAAGATGTCAAGGACTTCAAATTTGGGTGTAATTTGGTTTTTGTATCGAGCAATGATCGGTTTCGACATTATGTAACCTCACCTGGTATGTCTGTGGTGCTATTTTGCAACAAGGCAACCCACAAGCAAGTATTGCTAGTGTTGGAGCAAACCTGCTTGAGATTTCCATCTGTTAATTTCCTCAAGGTAGAAATTGAAGACCACCCCGACATAGCAAAATCAGAAGGCGCGAGTTCTGTGCCGGCATTCAAAATATACAAGAATGGATCAAAGGTTAAGGAAATTCCAGGCAACAATCTTGAGTTGTTAGAAAGATCGGTTAAATTGTACAGCAGCTGA 2034 0.4474 MAVKAKKKMENEVGCGFMGRIFHLTSYMLRKSSVHSLPTKVNDQSKTESKKPPNLESMATSTQSHKPSRKSPSDHRTPPPIKNKNPRPSDAARSSTSSCANSLQTKIQQNHKLNNNSRTQRQPTENSLVLARESTHYQKENENKSPLKLTGNLVVNTSPRTRTRTRESVPKNRDVMNSSLKYHTNTSVTGNIMRKSTDELAQFRSPKNRVDPEVLKTMGNEAYKQGRFEEALSLYERAIAIDSNKATFHCNKSAALMGLDRLLEAIVECQEAIRLEPSYNRPHHRLATIYLRLGEAEKALSYNVATPYSDSALAFQAQSLRNHLQKCIEARKSNDWNAILKETQSAISLGADSSPQVYALQTEALLKLFRHQEAYATYEKMPKFAINWCTKLFGLARCAYLFMIGAQAYLAVGRFEDAVTAAEQAAKLDPSDKEVSTVVKRARAISSARMSGNLLFKATKYTEACALYNEGLEHDPYNSVLLCNRAACRSKLGFFEKAIEDCNAALAVQPSYSKARLRRAYCNAKLERWEAAIQDYEMLLREKPGDEEVGRALFEAQLQLKMLRGEDVKDFKFGCNLVFVSSNDRFRHYVTSPGMSVVLFCNKATHKQVLLVLEQTCLRFPSVNFLKVEIEDHPDIAKSEGASSVPAFKIYKNGSKVKEIPGNNLELLERSVKLYSS 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2325 677 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 5 673 IPR044534 -
Acco10g2325 677 Pfam Tetratricopeptide repeat 406 479 - -
Acco10g2325 677 Pfam Tetratricopeptide repeat 491 546 - -
Acco10g2325 677 ProSiteProfiles TPR repeat profile. 212 245 IPR019734 GO:0005515
Acco10g2325 677 Gene3D Tetratricopeptide repeat domain 210 564 IPR011990 GO:0005515
Acco10g2325 677 MobiDBLite consensus disorder prediction 88 126 - -
Acco10g2325 677 CDD TRX_family 586 673 - -
Acco10g2325 677 ProSiteProfiles TPR repeat profile. 399 432 IPR019734 GO:0005515
Acco10g2325 677 SMART tpr_5 399 432 IPR019734 GO:0005515
Acco10g2325 677 SMART tpr_5 479 512 IPR019734 GO:0005515
Acco10g2325 677 SMART tpr_5 513 546 IPR019734 GO:0005515
Acco10g2325 677 SMART tpr_5 246 279 IPR019734 GO:0005515
Acco10g2325 677 SMART tpr_5 445 478 IPR019734 GO:0005515
Acco10g2325 677 SMART tpr_5 212 245 IPR019734 GO:0005515
Acco10g2325 677 SUPERFAMILY Thioredoxin-like 578 663 IPR036249 -
Acco10g2325 677 MobiDBLite consensus disorder prediction 51 67 - -
Acco10g2325 677 Pfam TPR repeat 219 255 - -
Acco10g2325 677 SUPERFAMILY TPR-like 450 561 IPR011990 GO:0005515
Acco10g2325 677 MobiDBLite consensus disorder prediction 36 126 - -
Acco10g2325 677 Gene3D Glutaredoxin 576 676 - -
Acco10g2325 677 SUPERFAMILY TPR-like 212 434 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2325 Acco-ChrAcco10 34993361 34996171 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2622 05 41785032 41787685 Acco10g2325 10 34993361 34996171 CCT
Acco10g2325 10 34993361 34996171 Acco10g2325 10 34993361 34996171 ECH