Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2622 ATGGCAACAAAGGTCAAAACCATGGTGGAGAATGATGTGGGCTGTGGTTTTGTGGGGAAGTTTTCCCTTCTCAGAAGCCACCTTCTGAGAAAATCATCAATCCATTCACTACCCTTGAAATCTGCCGACAATGTACAGAGCAAGGATAGCATAAAGGATTCCAAAAAAACTCCAAATCATGAATCCAAGGGCGTGCGAAATATCCCTACAGAGTCCAACAAACCAGATGTGGATCAGAAGACTCCCAGAAAGAGCACCTCCGGTCATCAGAGCAGTCAAATCCGGAGACTGTCCGATGCTGCCAGAAGCTCAACATCATCCTCTGGTAATTCTCTGGAGCTTGCTAGGATAATCACTAGTCACCAGCGAGACAACGAGAATAAAGCCACAGTTAACTTGAAACTTACTGGGAATTTGCTCGGAAATAACAGCCCCAGAACTACTGTTTCAAAGAAAGTAGAATCCGTTCCGAAGAATAAAGAGTTGAATACTGTGGCTAATTCTCACAATAACGCCGGGATGGGGAACATCATGAGGAAGAACAGCGATGAGCTTGCTCAACTTCGGAGACAGAGGATCCGAATAGACCCTGAAGTGCTGAAAACAGAGGGAAATGAAGCCTACAAACAGGGGAAATTCGAAGAAGCTTTGAGTCTCTATGACAGAGCCATTCAACTTGATTCAAATAAGGCAACTTATCATTGCAATAAGAGTGCAGCTTTAATGGGCTTAGGCCGACTTCCTGAAGCATTGGTCGAATGCGAGGAAGCTATTCTCCTGGAATCTTCTTATACAAGAGCTCACCACCGTTTGGCAGCTATATATCTCAGATTGGGAGAAGCAGAAATGGCAATAAAATCGAATAATTCAACTCCACATGCGGATTCCGTACTCGCATTCCAATCTCAGGCTCTTCAAAACCACCTTAACAAATGCCTTGAGGCTCGGAAAGTGAATGAGTGGAACGTTCTACTAAAGGAAACACAATCTGCAATTTCATTATGTGCTGATTCAGCGCCGCAGTTCTATGCTCTACAAACAGAAGCCTTACTGAAGCTCCTGAAACATGAAGAAGCTTCATCTACCCACGAAAAAATGCCCAAATTTGAACTTGATTGGTGTGTTAAGATTTTTGGCTTGCCACGTACTGCATACTTGTTGATAGTAGGTGCTCAAGTTCACTTGGCAGCCGGCAGGTTCGACGATGCTGTGACAGCTGGTCAGCAAGCAGCTGAACTTGATCCAACCAATAAAGAGGTAAACGGAGTGGTAAGAAGGACGAGAGCAGTGAGATCAGCGAGAATGAGCGGGAATTTACTGTTTAAGGCTTCAAAGTTTATGGAAGCATGTGGGGTTTACAATGAAGGGCTAGAGCATGATCCATTCAACTCAGTGTTGCTATGCAACAGAGCAGCATGCCGTTCTAAGCTGGGTCAATTTGAGAAAGCTATAGAAGATTGTAACTCAGCCCTTGCAATTCAGCCTAATTACAGCAAGGCAAGGTTACGGAGGGCAGATTGCAATGCTAAGTTGGAAAGATGGGGAGCAGCCATTCAAGACTATGAAATGTTGATGAGAGAGAAGCCAGGGGATGAGGAGGTGGCAAGGGCTTTATTTGAGGCCCAACTTCAACTTAAGATGCTGCGAGGAGAAGATATTAAGGACTTGAAATTTGGTTCCAATTTGGTTTCCGTCTCAAGCAATGATCGCTTTAGACATTATGTGACCTTGCCTGGTATGTCCGTGGTTCTGTTTTGCAACAAGGCAACCCACAGACAAGTATTGCTGGTATTGGAGCAAACATGCAAAAGATTTCCATCTGTTAATTTCCTCAAGGTGGAGATTGAAGACCATCCCTACTTGGCAAAATCAGAAGGCGTAAGCTCTGTCCCAGCCTTCAGAATATACAAGAACGGATCAAGGGTCAAAGAGATTCCAGGAAACAAACACGAGTTGTTAGAAAAATCAGTTAAACAGTATACTAGCTGA 1989 0.4414 MATKVKTMVENDVGCGFVGKFSLLRSHLLRKSSIHSLPLKSADNVQSKDSIKDSKKTPNHESKGVRNIPTESNKPDVDQKTPRKSTSGHQSSQIRRLSDAARSSTSSSGNSLELARIITSHQRDNENKATVNLKLTGNLLGNNSPRTTVSKKVESVPKNKELNTVANSHNNAGMGNIMRKNSDELAQLRRQRIRIDPEVLKTEGNEAYKQGKFEEALSLYDRAIQLDSNKATYHCNKSAALMGLGRLPEALVECEEAILLESSYTRAHHRLAAIYLRLGEAEMAIKSNNSTPHADSVLAFQSQALQNHLNKCLEARKVNEWNVLLKETQSAISLCADSAPQFYALQTEALLKLLKHEEASSTHEKMPKFELDWCVKIFGLPRTAYLLIVGAQVHLAAGRFDDAVTAGQQAAELDPTNKEVNGVVRRTRAVRSARMSGNLLFKASKFMEACGVYNEGLEHDPFNSVLLCNRAACRSKLGQFEKAIEDCNSALAIQPNYSKARLRRADCNAKLERWGAAIQDYEMLMREKPGDEEVARALFEAQLQLKMLRGEDIKDLKFGSNLVSVSSNDRFRHYVTLPGMSVVLFCNKATHRQVLLVLEQTCKRFPSVNFLKVEIEDHPYLAKSEGVSSVPAFRIYKNGSRVKEIPGNKHELLEKSVKQYTS 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2622 662 Pfam Tetratricopeptide repeat 391 463 - -
Acco05g2622 662 Pfam TPR repeat 204 245 - -
Acco05g2622 662 Gene3D Glutaredoxin 561 662 - -
Acco05g2622 662 MobiDBLite consensus disorder prediction 46 62 - -
Acco05g2622 662 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 44 658 IPR044534 -
Acco05g2622 662 SMART tpr_5 197 230 IPR019734 GO:0005515
Acco05g2622 662 SMART tpr_5 464 497 IPR019734 GO:0005515
Acco05g2622 662 SMART tpr_5 384 417 IPR019734 GO:0005515
Acco05g2622 662 SMART tpr_5 231 264 IPR019734 GO:0005515
Acco05g2622 662 SMART tpr_5 430 463 IPR019734 GO:0005515
Acco05g2622 662 SMART tpr_5 498 531 IPR019734 GO:0005515
Acco05g2622 662 MobiDBLite consensus disorder prediction 40 111 - -
Acco05g2622 662 Pfam Thioredoxin 598 657 IPR013766 -
Acco05g2622 662 MobiDBLite consensus disorder prediction 84 111 - -
Acco05g2622 662 SUPERFAMILY TPR-like 434 546 IPR011990 GO:0005515
Acco05g2622 662 ProSiteProfiles TPR repeat profile. 464 497 IPR019734 GO:0005515
Acco05g2622 662 Pfam Tetratricopeptide repeat 466 497 IPR001440 GO:0005515
Acco05g2622 662 CDD TRX_family 571 655 - -
Acco05g2622 662 Gene3D Tetratricopeptide repeat domain 195 549 IPR011990 GO:0005515
Acco05g2622 662 SUPERFAMILY Thioredoxin-like 550 660 IPR036249 -
Acco05g2622 662 ProSiteProfiles TPR repeat profile. 197 230 IPR019734 GO:0005515
Acco05g2622 662 ProSiteProfiles TPR repeat profile. 384 417 IPR019734 GO:0005515
Acco05g2622 662 SUPERFAMILY TPR-like 197 419 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2622 Acco-ChrAcco05 41785032 41787685 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2622 05 41785032 41787685 Acco10g2325 10 34993361 34996171 CCT