Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2045 ATGCTCAAGCAATTCTTCAGTAAGATTCCTCGCAAATCATCCAAATCTGATGAGGAGGAGTCATACCGGGACCTGGTGACCGCTTCACCGCGCGTCACCGGCAGGGCTAATCGGCCAAACGGTGGGAGCTCTTCCACTCGATCCAATGCTGTGAAAAGCACTTCTTCGTCGGCTGTTTTTCCCGCGAGCATCGTGTCTGGGATCGAACCCTTGGTGCCTTTCAAAGATGTGCCCCAAGCCGAGAAAATGAACCTGTTTGTGAGCAAGTTGAGCCTTTGTTGTGTGACTTTCGATTTCACTGACCCCGGTAAGAATGCCGTGGAAAAAGATGTCAAAAGGCGAACTTTGCTTGAACTCGTCGATTTTGTCGCTTCTGGGACGACTAAATTCAGTGAACCTGCTATTCTTGCTTTGAGTAGAATGTGTGCCATTAATCTCTTTAGGGCTTTCCCGCCACCGTATCGGTCTAATGGTAGTGGTGCTGGTGGAGAGATTGATGATGATGAACCAATATTCGACCATGCTTGGCCACATTTACAGTTTGTGTATGAATTGTTGCTTAATTTTATTAATTCTCCTTGTCTTGATGCGAAGGTGGCCAAAAAGTACATCGATCATTCATTTATCTCGAGATTACTTGAACTGTTTGATTCAGAGGATCCAAGAGAAAGAGACTGCTTGAAGACCATTCTGCACAGGGTTTATGGAAAGTTCATGGTGCATAGGCCCTATATTCGAAAATGTATGAACAACATATTTTATCGATTTGTGTATGAGTCCGAGAAACACTATGGCATCGCTGAGTTATTGGAGATTTCTGGGAGCATAATTTGTGGGTTTGCCTTGCCTTTGAAAGAGGAGCACAAGATCTTTTTATGGAGAGTCTTGATCCCCTTGCACAAGCCAAAATCTATAGGTGTTTATTTCCAGCAATTGTCTTATTGCGTTATACAGTTTGTAGAGAAGGAGCCGAAGCTAGCCAGCACTGTTATAAGGGGTTTGTTAAAATATTGGCCAATAACAAATAGTCAGAAGGAGGTCATGTTCTTGGGCGAGGTGGAAGAGATTTTGGAAGTAATCAGCATGGTAGAGTTCCAGAGGGTCATGGTCCGGTTGTTTTGGCGGATTGGTTGCTGCATTAACAGCTTACACTTTCAGGTGGCTGAAAGGGCCCTTTTCTTGTGGAACAGCGACCATATGGTGAACTTGATAGCACTTAACTGTCAGGTGATCCTGCCCATCATATTTCCTGCACTAGAGAGAAATACTAAGAGCCACTGGAGCCAAGCTGTGCTCAACTTAACTCTTAATATTAGAAAGATGTTCATAGAGATGGATGAGAAGCTATTTCTGTCATGCCATTCTCACTTCAAGGAGGAAGAAGCCTTTTTAACCTCAGCAGCTGCGAAGCGAAAAGAAGCATGGGATCGACTAGAGCATGCCGCCAGTCTCCAGCCTGTGATTGGAAATACAGCTGTTCTAGTGTGTCCCTTGACAACCTAA 1503 0.4458 MLKQFFSKIPRKSSKSDEEESYRDLVTASPRVTGRANRPNGGSSSTRSNAVKSTSSSAVFPASIVSGIEPLVPFKDVPQAEKMNLFVSKLSLCCVTFDFTDPGKNAVEKDVKRRTLLELVDFVASGTTKFSEPAILALSRMCAINLFRAFPPPYRSNGSGAGGEIDDDEPIFDHAWPHLQFVYELLLNFINSPCLDAKVAKKYIDHSFISRLLELFDSEDPRERDCLKTILHRVYGKFMVHRPYIRKCMNNIFYRFVYESEKHYGIAELLEISGSIICGFALPLKEEHKIFLWRVLIPLHKPKSIGVYFQQLSYCVIQFVEKEPKLASTVIRGLLKYWPITNSQKEVMFLGEVEEILEVISMVEFQRVMVRLFWRIGCCINSLHFQVAERALFLWNSDHMVNLIALNCQVILPIIFPALERNTKSHWSQAVLNLTLNIRKMFIEMDEKLFLSCHSHFKEEEAFLTSAAAKRKEAWDRLEHAASLQPVIGNTAVLVCPLTT 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2045 500 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 483 IPR002554 GO:0000159|GO:0007165|GO:0019888
Acco10g2045 500 MobiDBLite consensus disorder prediction 1 52 - -
Acco10g2045 500 MobiDBLite consensus disorder prediction 33 52 - -
Acco10g2045 500 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 73 482 IPR002554 GO:0000159|GO:0007165|GO:0019888
Acco10g2045 500 SUPERFAMILY ARM repeat 84 461 IPR016024 -
Acco10g2045 500 Gene3D - 78 481 IPR011989 -
Acco10g2045 500 FunFam Serine/threonine protein phosphatase 2A regulatory subunit 78 481 - -
Acco10g2045 500 PIRSF PP2A_B56 4 494 IPR002554 GO:0000159|GO:0007165|GO:0019888
Acco10g2045 500 MobiDBLite consensus disorder prediction 10 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2045 Acco-ChrAcco10 32883825 32886219 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2304 05 38978131 38980673 Acco10g2045 10 32883825 32886219 CCT
Acco10g2045 10 32883825 32886219 Acco10g2045 10 32883825 32886219 ECH