Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2304 ATGCTGAAGCAATTTCTCAGCAAGCTTCCTCGGAAGTCATCCAAATCCCACTCGAACGAGTCAAATCGGGGCGACTCTTCTCATTCCAGTCCCTCTCTGGACACTTCAGCACGCATTAACGGGAGAAGCAATCGATCAAATGGTGGGAATTCTTCCGGTCGACACAACAGTGCCAAACGCACTTCGTCTTCTGCAGTTTTTCCGGCAAGCATCGTGTCTGGGATCGAACCCTTAGTTCCGTTCAAAGATGTACCCAATGCGGAGAAGATGAGCCTGTTTGTGAGCAAATTGAGCCTTTGTTGCGTTACTTTCGATTTTACTGACCCCGTTAAAAATATCGTTGAGAAAGATGTCAAGAGGAAAACTTTGCTTGAACTAGTCGATTTTGTGGATTCTGGGTCGATGAAATTTAGTGAACACGCTATATTTGCTATGTGCAAAATGTGCGCCATTAATCTCTTCAGAGTTTTCCCGCCTAATTATCGGTCAAATGGCAAGCGTAGTGCTGGTTGCGAGAACGATGATGATGAGCCAACGTTTGATCCTGCTTGGCCACATTTACATATTGTGTATGAGTTGCTACTGAAATTTATTAATTTTTCTTGCCTTGACGCTAAGGTAGCGAAGAAATACTTTGACCATTCATTTATTTCGAAGTTGCTTGACTTGTTCGACTCAGAGGATCCGAGGGAAAGAGACTGCTTAAAGACAATCCTGCATAGGATTTATGGGAAGTTCATGGTGCATAGGCCCTATATCCGAAAATCTTTCAACAATATATTTTATCGGTTTGTGTTTGAGACGGAAAGACACAATGGAATTGCTGAGTTATTGGAGATTTTTGGGAGCATAATTAGTGGGTTTGCTTTACCTTTGAAAGAGGAACACAAGATTTTCTTGTGGAGGGTTTTGATCCCCTTGCACAAGCCAAAATCCGTGGGGCTCTATTTTCAGCAATTGTCCTACTGTGTCACACTGTTTATAGAGAAAGAGCCGAAGTTAGCAGGCACTGTGATAGACGGTTTATTAAAATATTGGCCAATAACAAATAGTCAGAAAGAGGTGATGTTCTTGGGTGAATTGGAAGAGATTTTGGAAGCAATCAACATGATCGAGTTCCAAAGGATCATGGTCCCGTTGTTTTGGCGGATCGGGTGCTGCATTAACAGCTTGCACTTTCAGGTCGCTGAAAGAGCCCTTTTCTTATGGAATAACGACCATATCGTCAACATGATTGCACATAATCGTCAGGTGATCCTTCCCATCATATTTCCAGCATTGGAGAGGAACTCTCAGAACCACTGGAATCATGCGGTGCTCAATTTGACTCTTAATATTAGAAAGATGTTCTTGGAGATGGATGAGAAGCTCTTCCTGTCCTGTCATTCTAACTTTAAAGAGGAAGAGGCAGGTCTAAGCTTAGCAGCCGAGCAGCGAAAGGAATCATGGAAAAGACTAGAGCATGCAGCCAGTCTGCAGCCTGTAATTGGAAATACTGCAGTATTGGTGTCTCCTTAA 1518 0.4295 MLKQFLSKLPRKSSKSHSNESNRGDSSHSSPSLDTSARINGRSNRSNGGNSSGRHNSAKRTSSSAVFPASIVSGIEPLVPFKDVPNAEKMSLFVSKLSLCCVTFDFTDPVKNIVEKDVKRKTLLELVDFVDSGSMKFSEHAIFAMCKMCAINLFRVFPPNYRSNGKRSAGCENDDDEPTFDPAWPHLHIVYELLLKFINFSCLDAKVAKKYFDHSFISKLLDLFDSEDPRERDCLKTILHRIYGKFMVHRPYIRKSFNNIFYRFVFETERHNGIAELLEIFGSIISGFALPLKEEHKIFLWRVLIPLHKPKSVGLYFQQLSYCVTLFIEKEPKLAGTVIDGLLKYWPITNSQKEVMFLGELEEILEAINMIEFQRIMVPLFWRIGCCINSLHFQVAERALFLWNNDHIVNMIAHNRQVILPIIFPALERNSQNHWNHAVLNLTLNIRKMFLEMDEKLFLSCHSNFKEEEAGLSLAAEQRKESWKRLEHAASLQPVIGNTAVLVSP 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2304 505 PIRSF PP2A_B56 3 502 IPR002554 GO:0000159|GO:0007165|GO:0019888
Acco05g2304 505 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 80 490 IPR002554 GO:0000159|GO:0007165|GO:0019888
Acco05g2304 505 SUPERFAMILY ARM repeat 92 486 IPR016024 -
Acco05g2304 505 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 491 IPR002554 GO:0000159|GO:0007165|GO:0019888
Acco05g2304 505 Gene3D - 85 489 IPR011989 -
Acco05g2304 505 MobiDBLite consensus disorder prediction 23 62 - -
Acco05g2304 505 FunFam Serine/threonine protein phosphatase 2A regulatory subunit 85 489 - -
Acco05g2304 505 MobiDBLite consensus disorder prediction 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2304 Acco-ChrAcco05 38978131 38980673 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2304 05 38978131 38980673 Acco10g2045 10 32883825 32886219 CCT