Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2007 ATGGGGAGGGGCGGAATTCCGTCAATTGATGACAGTAGAGATAGGCTTTTCTCAATCTCTGATTTGGGGTCTCCATGGAGTATTGAAGAGGGCAATTATCCTCCTGGAGGCTTATTTGCCAGCGTGAATCAGACGGGAATGGGGTTTGGCGTTCAACCCAACACTCCTGATTCCCGCAACAATGGCGAGGAAAAACTTCCCTATTTTGGATTGTTCACGAAGTATGTTCAATCACTGGGCAAAGTTGAGAATGATAGAGTCAAGGAAGAGGAAGAGAATAAAGGCAGGAAGAAGGGTGGTCTTAAACTGAAAATTAAGATCAGAAATCCTTCGCTGAGGAGGTTAATTAGTGGTGCCATAGCCGGGGCGGTGTCCCGGACCGCAGTGGCACCTTTGGAGACTATAAGGACTCATTTAATGGTTGGCAGTAGTGGCCATTCTTCCACTGAGGTGTTCGGGAATATTATGAAGACTGATGGTTGGACTGGATTGTTTAGGGGTAATCTCGTTAATGTGATTCGGGTTGCACCTAGCAAGGCCATAGAGCTGTTTGTTTATGACTCAGTCAACAAGAATCTATCCCCTAAACCCGGGGAACAGCCAAAACTCCCTGTATCTCCATCATTGCTTGCTGGCGCCTGTGCAGGAGTCAGTTCTACTATATGCACATACCCACTTGAGTTAGTCAAGACTCGACTTACAATTCAGAGAGGTGTTTACAATGGTTTGCTTGATGCATTCGTAAAGATAATTCGTGATGAGGGCCCTGCAGAACTTTATCGAGGCCTTACTCCCAGCCTTATCGGAGTGATTCCATATGCAGCTACCAACTACTTTGCCTATGACACTCTGCGCAAAGCATACCGAAAAATATTTAAGCAAGAGAAGATCGGCAACATTGAAACCCTCTTGATCGGATCAGCTGCTGGTGCTATTTCAAGCACCGCTACTTATCCTCTCGAGGTGGCTCGCAAGCAGATGCAAGTGGGAGCTCTGAGCGGAAGGCAGGTTTATAAAAATGTGATTCATGCTCTTGCAAGCATACTGGAACAAGAAGGGATTCCGGGTTTATATAGAGGGTTGGGACCAAGCTGTACCAAGTTAGTACCAGCCGCTGGAATCTCTTTCATGTGCTATGAAGCGTGCAAGAGAATACTGGTTGAGATAGATGGTGAGGAATAG 1182 0.4636 MGRGGIPSIDDSRDRLFSISDLGSPWSIEEGNYPPGGLFASVNQTGMGFGVQPNTPDSRNNGEEKLPYFGLFTKYVQSLGKVENDRVKEEEENKGRKKGGLKLKIKIRNPSLRRLISGAIAGAVSRTAVAPLETIRTHLMVGSSGHSSTEVFGNIMKTDGWTGLFRGNLVNVIRVAPSKAIELFVYDSVNKNLSPKPGEQPKLPVSPSLLAGACAGVSSTICTYPLELVKTRLTIQRGVYNGLLDAFVKIIRDEGPAELYRGLTPSLIGVIPYAATNYFAYDTLRKAYRKIFKQEKIGNIETLLIGSAAGAISSTATYPLEVARKQMQVGALSGRQVYKNVIHALASILEQEGIPGLYRGLGPSCTKLVPAAGISFMCYEACKRILVEIDGEE 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2007 393 Gene3D Mitochondrial carrier domain 106 389 IPR023395 -
Acco10g2007 393 SUPERFAMILY Mitochondrial carrier 110 381 IPR023395 -
Acco10g2007 393 Pfam Mitochondrial carrier protein 203 290 IPR018108 -
Acco10g2007 393 Pfam Mitochondrial carrier protein 111 193 IPR018108 -
Acco10g2007 393 Pfam Mitochondrial carrier protein 297 387 IPR018108 -
Acco10g2007 393 ProSiteProfiles Solute carrier (Solcar) repeat profile. 297 385 IPR018108 -
Acco10g2007 393 FunFam Adenine nucleotide transporter BT1, chloroplastic/mitochondrial 107 390 - -
Acco10g2007 393 ProSiteProfiles Solute carrier (Solcar) repeat profile. 203 287 IPR018108 -
Acco10g2007 393 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 192 IPR018108 -
Acco10g2007 393 PRINTS Mitochondrial carrier protein signature 260 278 IPR002067 GO:0055085
Acco10g2007 393 PRINTS Mitochondrial carrier protein signature 167 187 IPR002067 GO:0055085
Acco10g2007 393 PRINTS Mitochondrial carrier protein signature 127 141 IPR002067 GO:0055085
Acco10g2007 393 PRINTS Mitochondrial carrier protein signature 114 127 IPR002067 GO:0055085
Acco10g2007 393 PRINTS Mitochondrial carrier protein signature 218 236 IPR002067 GO:0055085
Acco10g2007 393 PRINTS Mitochondrial carrier protein signature 306 328 IPR002067 GO:0055085
Acco10g2007 393 PANTHER SOLUTE CARRIER FAMILY 25 98 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2007 Acco-ChrAcco10 32655575 32657765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2007 296 393 Organic Solute Cotransporters AT4G32400 33.000 1.15e-06 48.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2275 05 38729046 38731911 Acco10g2007 10 32655575 32657765 CCT
Acco10g2007 10 32655575 32657765 Acco10g2007 10 32655575 32657765 ECH