Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2275 ATGGGTGGGAAGGGAGTACAGCTATTTGATGATAAAATAGATGTATTTTTCTCTGTCTGCAATTTGGGGTCTCAGTGGAGCCTTCAAGATGGGTATATGCATCCCGGAGGCTTATTTGCCAGCGCCAGTCAGGTGGGAATGGGATTTGGTTTTCAGCCGCAACCCCAACCCAACCCTTCTGATTCCCGGGACGGCGGCGGCTTGAAATTCCCCTCTGCCGAATTGTTCGTCAAGCATGTGGAATCACCGGGGAAAGTTCTGATTACTGAAGTTTCAGAGGAGGAAGGAATTCTGAGCAAGAAAAAGGGTGGCCTTAAACTGAAAATTAAGATTAAAAATCCTTCGCTTAGGAGGTTGATTAGTGGCGCCATAGCTGGGGCAGTATCCCGCACGACCGTGGCACCGTTGGAGACCATTAGGACTCATTTAATGGTGGGGAGTAGTGGCCATTCAACTGTTGAGGTCTTCAACGATATTATGAAGACTGATGGTTGGAAGGGATTGTTTAGGGGTAATCTCGTGAACGTGATTCGGGTTGCACCTAGTAAGGCCATAGAGCTATTTGCTTATGACACAGTGAACAAAAACTTATCCCCAAAACCCGGGGAACAGCCCAAACTTCCTATTCCCGCATCATTAATTGCTGGTGCATGTGCTGGAGTTAGTTCGACGATTTGCACATATCCTCTTGAATTAGTCAAGACTCGACTGACTATCCAGAGAGGAGTTTATAAAGGTCTGCTTGATGCATTCATGAAAATAATTAAAGAAGAAGGCCCTGCAGAACTCTACAGGGGCCTTGCTCCCAGTCTAATAGGGGTAATTCCATATGCTGCCACCAATTACTTTGCATACGACACATTAAGGAAAGCATACCGAAAAGTTTTCAAGACTGAGAAGATTGGCAACATTGAAACCCTTTTGATCGGATCAGCGGCCGGGGCCATATCAAGCACTGCCACATTTCCTCTGGAGGTAGCTCGCAAGCACATGCAAGTGGGAGCTCTCAGTGGAAGGCAGGTTTACAAGAATGTTATTCATGCACTCGCTAGCATACTTGAACAGGAAGGAGTCCAAGGTTTATATAGGGGTTTGGGACCCAGCTGCATGAAGCTAGTGCCAGCCGCTGGAATCTCTTTTATGTGCTATGAAGCTTGCAAGAAGATACTGGTGGAGGAAGGGGATGAGGAATAA 1194 0.4673 MGGKGVQLFDDKIDVFFSVCNLGSQWSLQDGYMHPGGLFASASQVGMGFGFQPQPQPNPSDSRDGGGLKFPSAELFVKHVESPGKVLITEVSEEEGILSKKKGGLKLKIKIKNPSLRRLISGAIAGAVSRTTVAPLETIRTHLMVGSSGHSTVEVFNDIMKTDGWKGLFRGNLVNVIRVAPSKAIELFAYDTVNKNLSPKPGEQPKLPIPASLIAGACAGVSSTICTYPLELVKTRLTIQRGVYKGLLDAFMKIIKEEGPAELYRGLAPSLIGVIPYAATNYFAYDTLRKAYRKVFKTEKIGNIETLLIGSAAGAISSTATFPLEVARKHMQVGALSGRQVYKNVIHALASILEQEGVQGLYRGLGPSCMKLVPAAGISFMCYEACKKILVEEGDEE 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2275 397 Pfam Mitochondrial carrier protein 301 392 IPR018108 -
Acco05g2275 397 Pfam Mitochondrial carrier protein 207 294 IPR018108 -
Acco05g2275 397 Pfam Mitochondrial carrier protein 114 197 IPR018108 -
Acco05g2275 397 Gene3D Mitochondrial carrier domain 110 394 IPR023395 -
Acco05g2275 397 ProSiteProfiles Solute carrier (Solcar) repeat profile. 301 389 IPR018108 -
Acco05g2275 397 ProSiteProfiles Solute carrier (Solcar) repeat profile. 113 196 IPR018108 -
Acco05g2275 397 ProSiteProfiles Solute carrier (Solcar) repeat profile. 207 291 IPR018108 -
Acco05g2275 397 FunFam Adenine nucleotide transporter BT1, chloroplastic/mitochondrial 111 393 - -
Acco05g2275 397 PRINTS Mitochondrial carrier protein signature 222 240 IPR002067 GO:0055085
Acco05g2275 397 PRINTS Mitochondrial carrier protein signature 171 191 IPR002067 GO:0055085
Acco05g2275 397 PRINTS Mitochondrial carrier protein signature 264 282 IPR002067 GO:0055085
Acco05g2275 397 PRINTS Mitochondrial carrier protein signature 131 145 IPR002067 GO:0055085
Acco05g2275 397 PRINTS Mitochondrial carrier protein signature 118 131 IPR002067 GO:0055085
Acco05g2275 397 PRINTS Mitochondrial carrier protein signature 310 332 IPR002067 GO:0055085
Acco05g2275 397 SUPERFAMILY Mitochondrial carrier 114 385 IPR023395 -
Acco05g2275 397 PANTHER SOLUTE CARRIER FAMILY 25 107 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2275 Acco-ChrAcco05 38729046 38731911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2275 1 396 Organic Solute Cotransporters AT4G32400 69.173 0.0 527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2275 05 38729046 38731911 Acco10g2007 10 32655575 32657765 CCT
Acco05g2275 05 38729046 38731911 Acco05g2275 05 38729046 38731911 ECH