Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1986 ATGGCTTCTTCCACCACCAAGCTCTGTGCCACCATTTTGGTGCTTTACCTTCTCGCTTGCTCGACCTTCACGGAAGCCTGTGGGTCATGCAACCCCGCCAAGTGTCCCCTGGACACACTGAAGCTAGGAGTATGTGCTGACGTCCTGGGCCTTGTAAAAGTCAACGTCGGGTCTCCTCCGACCAGCAATTGTTGCCCATTGCTGCGAGGTTTGGCTGATTTAGAGGCAGCTCTTTGCCTCTGCACTGCCATTAAGGCCAACGTTCTGGGTATAAACTTGAACGTACCTCTCAGCCTCAGTTTGGTCCTTAGCTATTGTCAAAAATCTGTTCCTTCTGGTTTTCAATGTCCCTAG 354 0.5141 MASSTTKLCATILVLYLLACSTFTEACGSCNPAKCPLDTLKLGVCADVLGLVKVNVGSPPTSNCCPLLRGLADLEAALCLCTAIKANVLGINLNVPLSLSLVLSYCQKSVPSGFQCP 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1986 117 SMART aai_6 35 116 IPR016140 -
Acco10g1986 117 Gene3D - 32 117 IPR036312 -
Acco10g1986 117 PANTHER - 9 116 - -
Acco10g1986 117 FunFam pEARLI1-like lipid transfer protein 1 33 117 - -
Acco10g1986 117 Pfam Hydrophobic seed protein 35 117 IPR027923 -
Acco10g1986 117 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 38 117 IPR036312 -
Acco10g1986 117 CDD HPS_like 32 116 IPR027923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1986 Acco-ChrAcco10 32495526 32495879 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1986 17 117 Acyl Lipid Metabolism Gene Families AT4G22490 37.624 2.86e-14 62.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2239 05 38416619 38417029 Acco10g1986 10 32495526 32495879 CCT
Acco10g1986 10 32495526 32495879 Acco10g1986 10 32495526 32495879 ECH