Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2239 ATGGCTACCCACAAGCTCTGTGCAATCATCTTCGTTCTCTCTCTCCTTGCCCACTCAATACTCATCACTGCCCACCACCCCAAACCACCATGTCCCTCGACGCCCACCCCATCGACCCCGATGCCCACTCCCACAACACCGACGCCGGAGACGGACAAATGCCCGAAGGACACGCTGAAGCTGTCGTTGTGTGCGGATGTTCTGGGGCTTGTTAACGTTGTTGTGGGAACTCCATTGTCGGCTAAGTGTTGTGCATTGTTGGATGGGTTGGTGGACTTGGAGGCAGCACTTTGTCTGTGCACAGCGATTAAGGCCAACTTGCTTGGAATCAACCTTAATGTCCCCGTCGCTCTCAGCTTAATCCTTAGTGCTTGTCAGAAGACAGTTCCTCCCGGTTTTCAATGTCCTTAG 411 0.5353 MATHKLCAIIFVLSLLAHSILITAHHPKPPCPSTPTPSTPMPTPTTPTPETDKCPKDTLKLSLCADVLGLVNVVVGTPLSAKCCALLDGLVDLEAALCLCTAIKANLLGINLNVPVALSLILSACQKTVPPGFQCP 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2239 136 Gene3D - 52 136 IPR036312 -
Acco05g2239 136 Pfam Hydrophobic seed protein 54 136 IPR027923 -
Acco05g2239 136 SMART aai_6 54 135 IPR016140 -
Acco05g2239 136 PANTHER - 7 135 - -
Acco05g2239 136 MobiDBLite consensus disorder prediction 29 49 - -
Acco05g2239 136 MobiDBLite consensus disorder prediction 29 52 - -
Acco05g2239 136 FunFam pEARLI1-like lipid transfer protein 1 52 136 - -
Acco05g2239 136 CDD HPS_like 52 135 IPR027923 -
Acco05g2239 136 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 57 136 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2239 Acco-ChrAcco05 38416619 38417029 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2239 46 136 Acyl Lipid Metabolism Gene Families AT4G22490 39.560 7.89e-19 74.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2239 05 38416619 38417029 Acco10g1986 10 32495526 32495879 CCT
Acco05g2239 05 38416619 38417029 Acco05g2239 05 38416619 38417029 ECH