Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1940 ATGAAGTTTATGAAGTTGGGTTCCAAGCCTGATGCCTTTCAAGCTGATGGAAAGTCTATCAGGCATGCGTCATCTGAATTGACTACAGATATTGTCATAAATGTTGGCGAAGTCAAGTTTTACCTCCATAAGTTCCCTTTACTGTCCAAGTGCAATCGATTACAAAAGCTAGTGTCAAAAGCTAATGAAGAGGATTCTGACGAAATTTTCTTGAATGAGCTCCCTGGAGGGGCCAAGGCATTTGAATTATGTGCAAAATTCTGCTATGGAATGACTGTTACTCTTGGTGCCCACAACATTGTGGCTGCCCGCTGTGCAGCTGAGTATCTTGAAATGACTGAGGATATTGATAAAGGAAACTTAATTTTTAAAATTGAGGTATTTCTTAATTCGAGCATCTTGCGGAGCTGGAAGGATTCCCTAATTGTTCTACAAACTACTAAATCTTTTCTCCCATGGTCTGAGGATTTGAACATCATTGGCAGATGTATAGATTCTATAGCTTCTAAAACTTCTGTGGACCCACCTAACATCACATGGTCCTACACATATAACCGGAGACTAACAGAGCCTGATAGAATTACGGAGCACAAGATGACATATGAAGAGAAAGTTGAGTCTGTTCCCAAGGATTGGTGGGTTGAAGATATTTGTGAGCTGGACATTGATATTTACAAACGAGTAATGATTACTGTGAAGTCAAAGGGAAGAATGGATGGTACTGTGATTGGGGAGGCACTGAAAACGTATGCAATTAGGTGGTTGCCTGATTCCATTGAGGCATTGGTTTCTGAAGCTCATGGACGGAGAAACAAATTTCTGGTGGAAACGATTGTCTGTCTATTGCCATCTGACAATGCCATGTGTTGTTCTTGTAGTTTCCTTCTGAAACTATTGAAAGTGGCCATTCTAGTAGGTGTAGATGAGTCGGAAAAAGAGGAATTAATAAAGAATACCTGCCTTAAATTGCATGAAGCTTCCATCAAAGATCTGCTGATCCCTGCAAGGCCTCCTCAGACTACCATATATGATGTTCAGTTGGTACAATGTCTTTTGAATCGATATATGAATGAAAAGGGCATCAGCTGCGATATGGAAGTTTCAGAGAAGAAAGATAAAGCTAGTTTAGCACATATGTTCCTTGTGAATGTTGGCCAATTGGTGGACAATTTTCTTGCTGAAGTTGCACGTGATCCGAATCTCAGCCTTTCTAGTTTTATTGATTTGTCACAAACAGTTCCAGTGTTCGCTAGACCCAATCATGATGGTCTTTACAGAGCCATTGATATGTACTTGAAGGAGCACCCAAATATGACAAAAGCTGAAAGGAAGAAGCTATGTGGACTGTTGGATGTGAAGAGACTGTCTGTGGATGCTTCTATGCATGCTGCACAGAATGAGCGGCTTCCACTTCGGGTTATAGTGCAGGTTCTCTTTTTTGAGCAGGTCAGGGCTTCAGCCAGCGTCCAAGCTCTTGGTAATAAGAATTCACGTAAGCCTTTGTACACAGTTAGCACGGATGAAGAATGTGAGAAAAGTGTTGGTGAGAAGTGCCAATCCCTCGAGAGCCAGATGTGTGATTTGAAGATCAAGGAAGAAGAATTTCCCAAGAATGGGAAACTGAACAAGAATAATAGCAAAAGCAGCAGAAGTGGAATGCAATTACTTCATTCACGTTCAAGGAGAATCTTTGACAAGCTATGGGTTGGTGGTAAGGGACAAGGAGAGAGCAGGAGCTCAGAGACATCGGGAAGTTCGAATAGCCCAACATCTATTGTCCCGGGATACACCAAATCATCTGGTTCATCTTCTAGACACAGAAGGCATTCTGTTTCGTAA 1839 0.416 MKFMKLGSKPDAFQADGKSIRHASSELTTDIVINVGEVKFYLHKFPLLSKCNRLQKLVSKANEEDSDEIFLNELPGGAKAFELCAKFCYGMTVTLGAHNIVAARCAAEYLEMTEDIDKGNLIFKIEVFLNSSILRSWKDSLIVLQTTKSFLPWSEDLNIIGRCIDSIASKTSVDPPNITWSYTYNRRLTEPDRITEHKMTYEEKVESVPKDWWVEDICELDIDIYKRVMITVKSKGRMDGTVIGEALKTYAIRWLPDSIEALVSEAHGRRNKFLVETIVCLLPSDNAMCCSCSFLLKLLKVAILVGVDESEKEELIKNTCLKLHEASIKDLLIPARPPQTTIYDVQLVQCLLNRYMNEKGISCDMEVSEKKDKASLAHMFLVNVGQLVDNFLAEVARDPNLSLSSFIDLSQTVPVFARPNHDGLYRAIDMYLKEHPNMTKAERKKLCGLLDVKRLSVDASMHAAQNERLPLRVIVQVLFFEQVRASASVQALGNKNSRKPLYTVSTDEECEKSVGEKCQSLESQMCDLKIKEEEFPKNGKLNKNNSKSSRSGMQLLHSRSRRIFDKLWVGGKGQGESRSSETSGSSNSPTSIVPGYTKSSGSSSRHRRHSVS 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1940 612 CDD BTB_POZ_NPY3-like 25 124 - -
Acco10g1940 612 MobiDBLite consensus disorder prediction 566 612 - -
Acco10g1940 612 ProSiteProfiles BTB domain profile. 29 97 IPR000210 GO:0005515
Acco10g1940 612 PANTHER OS12G0117600 PROTEIN 25 555 IPR043454 -
Acco10g1940 612 MobiDBLite consensus disorder prediction 575 601 - -
Acco10g1940 612 MobiDBLite consensus disorder prediction 537 556 - -
Acco10g1940 612 Pfam BTB/POZ domain 25 117 IPR000210 GO:0005515
Acco10g1940 612 ProSiteProfiles NPH3 domain profile. 211 484 IPR027356 -
Acco10g1940 612 Gene3D Potassium Channel Kv1.1; Chain A 8 120 IPR011333 -
Acco10g1940 612 MobiDBLite consensus disorder prediction 541 556 - -
Acco10g1940 612 Pfam NPH3 family 211 460 IPR027356 -
Acco10g1940 612 SUPERFAMILY POZ domain 24 115 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1940 Acco-ChrAcco10 32178854 32182406 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1940 27 483 EF-hand Containing Proteins AT3G44820 34.836 5.31e-93 298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2183 05 37894358 37898964 Acco10g1940 10 32178854 32182406 CCT