Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2183 ATGAAATCCTCTGAGCAATATCGTATTACGCCTTGCCACTACGCATACATAAACACAGACTCAACTTTCCCTCTCTCTTCTTCTTTTCCTGCAACATTCAGCCACTGGAGAGACAAACGCGTCAGGCCTAGAAAGATGATCATTCATAGCGTCCTCAGAGTAAGAAAAAAAATGAAGTTTATGAAGTTGGGTTCCAAGCCTGATGCTCTTCAAGCTGATGGAAAATCTATCATCAGGTATGTGTCACCCGATCTGTCCACTGATGTCATCATTAATGTGGGTGAAGTGAAGTTTTACCTTCATAAGTTCCCTCTCCTGTCTAAGAGTAATAGGCTGCAGAAGCTAGTATCAAAGGAAAACGAAGAGAATTCTGATGAAATACACATAGCTGACTTCCCTGGAGGGCCTAAAGCCTTTGAAATATGTGCAAAATTCTGCTATGGAATAACCGTTACGCTTAATGCGTACAACGTCGTGGCTGCCCGTTGTGCAGCAGAGTACCTTGAGATGACCGAGGACAACGATAAAGGGAACTTAATTTTCAAGATTGAGGTTTTCCTAAACTCGAGTATCTTCCGGAGCTGGAAGGATTCTATCATTGTTCTCCAGACTACTAAATCTCTTCTGCCTTGGTCTGAGGATCTGAAGATCATTGCAAGATGCATAGACTCCATAGCTTCAAAAACTTCTGTGAACCCAGAACACATCATGTGGTCCTACACATATAACCGGAAAGTAAGTGAGCCTGATAAAATTACTGAGGACCAGATAGCAACTCAGGAGAAAATCGAGTCGGTTCCTAAGGATTGGTGGGTCGAAGATGTATGCGAGCTGGACGTTGATCTTTACAAACGAGTAATGATTGCTGTAAAATCAAAGGGAAGAATGGATGGTGTCATAATTGGAGAGGCTCTAAAGGTCTATGCAGTGAGATGGTTGCCTGAATCTGTTGAGGCATTAGCTTCTGATGCTCATGCTCGGAGGAACAAAACCTTAGTAGAAACAATTGTCTGTTTATTGCCGTCTGACTATGGTGGAGGCTGTTCATGTTGCTTCTTGCTGAAGCTATTGAAAGTGGCCATATTAGTTGGAGCAGGCGAGTCGTCAAGAGATGAATTGATGAAGAGCATTAGCTTCAGATTGCATGAAGCTTCTGTTAAAGACTTGTTGATCCCTGCAAGGCCTCCTCAAACAACCATATATGATGTTCAATTAGTACAATCTCTTTTGAATGGATGGATGACTTTTGTAAAGGGAAGTTGTGATACGGAAGTTGATGAGTATGGAGACAAAGGAAAAAGCATGTTGAACATCGGCAAATTAGTGGATGGCTACCTAGCAGAAATTGCACATGATTCAACACTCAGCATGTCTAGTTTCATTGAATTGACACAGTCAGTTCCAGAGTTTGCTCGACCAAAGCACGATGGCCTCTACAGAGCTATTGACATTTACTTGAAGGAGCACCCGAGCCTAACAAAAGCAGAAAGGAAGCAGATATGTGGTTTGATGGATGTGAAGAAGTTGACAGAGGAAGCATCGATGCATGCTGCGCAGAACGACCGGCTTCCACTTCGAGTTGTTGTGCAGGTTCTCTTCTATGAGCAGCTTAGAGCTTCTGCCAATGTTCGAGCTCTCGGTGGCAATCAATGCGACAAGGATTATGAGAAAACGACAGGGGAGAACTGTGAGTCAGTCAAAGATCAGATGAGCCATTTGAGCATCAAAGATGAAGAAGAGTTCAGTAAGAAAGGGAAACTGAGCAAGAAGAATAGCAAAAGCAGTAAAAGTGGCATGCAACTCCTACCATCTCGATCGAGGAGAATCTTCGATAAGTTGTGGATTGTGGGGAAAGGACAAGGAGAGAATAGGAGCTCTGAGACTTCAGGGAGTTCTAATAGCCCAACATCAGTAGTCCCTGTAGATACCAAATCATCTGGTTCTTCAAGACAAAGGAGGCATTCTGTCTCATAG 1974 0.4316 MKSSEQYRITPCHYAYINTDSTFPLSSSFPATFSHWRDKRVRPRKMIIHSVLRVRKKMKFMKLGSKPDALQADGKSIIRYVSPDLSTDVIINVGEVKFYLHKFPLLSKSNRLQKLVSKENEENSDEIHIADFPGGPKAFEICAKFCYGITVTLNAYNVVAARCAAEYLEMTEDNDKGNLIFKIEVFLNSSIFRSWKDSIIVLQTTKSLLPWSEDLKIIARCIDSIASKTSVNPEHIMWSYTYNRKVSEPDKITEDQIATQEKIESVPKDWWVEDVCELDVDLYKRVMIAVKSKGRMDGVIIGEALKVYAVRWLPESVEALASDAHARRNKTLVETIVCLLPSDYGGGCSCCFLLKLLKVAILVGAGESSRDELMKSISFRLHEASVKDLLIPARPPQTTIYDVQLVQSLLNGWMTFVKGSCDTEVDEYGDKGKSMLNIGKLVDGYLAEIAHDSTLSMSSFIELTQSVPEFARPKHDGLYRAIDIYLKEHPSLTKAERKQICGLMDVKKLTEEASMHAAQNDRLPLRVVVQVLFYEQLRASANVRALGGNQCDKDYEKTTGENCESVKDQMSHLSIKDEEEFSKKGKLSKKNSKSSKSGMQLLPSRSRRIFDKLWIVGKGQGENRSSETSGSSNSPTSVVPVDTKSSGSSRQRRHSVS 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2183 657 CDD BTB_POZ_NPY3-like 79 182 - -
Acco05g2183 657 MobiDBLite consensus disorder prediction 619 657 - -
Acco05g2183 657 ProSiteProfiles BTB domain profile. 87 155 IPR000210 GO:0005515
Acco05g2183 657 ProSiteProfiles NPH3 domain profile. 269 538 IPR027356 -
Acco05g2183 657 Gene3D Potassium Channel Kv1.1; Chain A 73 176 IPR011333 -
Acco05g2183 657 SUPERFAMILY POZ domain 80 172 IPR011333 -
Acco05g2183 657 SMART BTB_4 87 185 IPR000210 GO:0005515
Acco05g2183 657 Pfam NPH3 family 269 514 IPR027356 -
Acco05g2183 657 MobiDBLite consensus disorder prediction 570 587 - -
Acco05g2183 657 Pfam BTB/POZ domain 87 172 IPR000210 GO:0005515
Acco05g2183 657 MobiDBLite consensus disorder prediction 621 657 - -
Acco05g2183 657 MobiDBLite consensus disorder prediction 549 602 - -
Acco05g2183 657 PANTHER OS12G0117600 PROTEIN 83 613 IPR043454 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2183 Acco-ChrAcco05 37894358 37898964 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2183 85 537 EF-hand Containing Proteins AT3G44820 34.888 8.42e-90 291
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2183 05 37894358 37898964 Acco10g1940 10 32178854 32182406 CCT
Acco05g2183 05 37894358 37898964 Acco05g2183 05 37894358 37898964 ECH