Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1748 ATGGGGGCTTGGGCTATAGCCGTCCACGGTGGCGCTGGCGTCGATCCTAATCTCCCCGCCCACCGTCAAGAACAAGCCAAGCAACTCCTCACGCGCTGTCTCCAACTCGGCATTTCTGCTCTTAATTCCAATCTTCCCGCCATTGATGTCGTTGAGCTCGTCGTGAGGGAACTGGAAACAGATCCACTGTTCAACTCGGGACGTGGATCTGCGCTGACGGAAAACGGGACAGTGGAAATGGAGGCAAGTATCATGGACGGCACAAAAAGAAGATGCGGTGCCGTGTCGGGCGTTACCACCGTCAAGAACCCGATATCGCTGGCACGATTGGTCATGGACAAATCCCCTCATTCCTACCTAGCCTTCTCCGGCGCTGAACAATTCGCCAGGCAGCAGGGTGTGGAAACAGTGGAAAACGAGTACTTCATCACTCCTGAAAATGTTGGCATGTTGAAGCTGGCAAGACAAGCGAACGCTATTCTGTTTGATTACAGGATCCCTGTTGGGAACGAAACGTGCGGTGCGGGGATAGAGAGTCCACTGCAAATGAATGGACTGCCCATCAGTGTGTACGCGCCGGAGACGGTGGGGTGCGTGGTGGTGGACAGTGAGGGGCGGTGTGCCGCGGGGACGTCAACGGGGGGGTTGATGAACAAAATGACAGGAAGGATCGGGGACTCGCCGTTGATAGGTGCGGGGACGTACGCGTGTGAGGTGTGCGGGGTGTCGTGCACGGGGGAGGGGGAGGCAATCATACGGGGGACACTGGCGCGTGATGTGGCGGCGGTGATGGAATACAAAGGAATGAAGCTTCAGGAAGCCGTTGACTTCGTGATAAAGGAAAGGTTGGACGAAGGAATGGCAGGTCTGATTGCTGTGTCTAATACTGGTGAAGTTGCCTGTGCCTTCAATTGTAACGGCATGTTTAGAGGTTGCGCCACTCAGGACGGCTTCATGGAAGTCGGAATCTGGGAATAG 978 0.5552 MGAWAIAVHGGAGVDPNLPAHRQEQAKQLLTRCLQLGISALNSNLPAIDVVELVVRELETDPLFNSGRGSALTENGTVEMEASIMDGTKRRCGAVSGVTTVKNPISLARLVMDKSPHSYLAFSGAEQFARQQGVETVENEYFITPENVGMLKLARQANAILFDYRIPVGNETCGAGIESPLQMNGLPISVYAPETVGCVVVDSEGRCAAGTSTGGLMNKMTGRIGDSPLIGAGTYACEVCGVSCTGEGEAIIRGTLARDVAAVMEYKGMKLQEAVDFVIKERLDEGMAGLIAVSNTGEVACAFNCNGMFRGCATQDGFMEVGIWE 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1748 325 Pfam Asparaginase 4 324 IPR000246 GO:0016787
Acco10g1748 325 PANTHER L-ASPARAGINASE 4 311 IPR000246 GO:0016787
Acco10g1748 325 FunFam Isoaspartyl peptidase/L-asparaginase 195 325 - -
Acco10g1748 325 CDD Asparaginase_2 5 317 - -
Acco10g1748 325 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 322 IPR029055 -
Acco10g1748 325 Gene3D (Glycosyl)asparaginase 195 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1748 Acco-ChrAcco10 30679714 30681194 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1748 6 259 Miscellaneous Gene Families AT4G00590 29.242 9.58e-21 90.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g1965 05 36007609 36010222 Acco10g1748 10 30679714 30681194 CCT
Acco10g1748 10 30679714 30681194 Acco10g1748 10 30679714 30681194 ECH