Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1965 ATGCCAGGGAAAGAACCCAGAAGGTTTCCTCGACGTTTGAAGTCCGAGATTGTCTATAAAACCGCTGCCAACGCTCGGCCATTTGCAGTGGTTCACGAACTTATAAGCTGTGAGGGCAGAGACAATAAGAGGGGGAGAGAGAGAGAGATGGGAGGTTGGGCAATCGCGGTCCACGGCGGCGCTGGTGTCGACCCAAATCTCCCACCCCAGCGTCAGGAGGAAGCTAAGCAGCTCCTCACTCGCTGTCTCCATCTTGGAATCTCTGCTCTTCGTTCCAACCTTCCCGCCATCGATGTCGTCGAACTTGTCGTGAGGGAACTGGAAACAGATCCCCTGTTCAACTCCGGCCGTGGATCTGCTCTGACAGAGAAGGGGACAGTGGAAATGGAGGCGAGCATCATGGATGGCCCAAAAAGAAGATGCGGCGCCGTATCGGGTGTCACCACCGTGAAAAACCCCATTTCATTGGCCCGACTTGTAATGGACAAGTCCCCCCATTCGTACCTTGCTTTCGGCGGCGCCGAACAATTCGCGAGACAACAGGGTGTGGAGCTGGTCGAAAACGAATACTTCATCACCCCTGAGAATGTGGGCATGCTGAAGCTGGCAAAGGAAGCGAACGCTATTCTGTTTGACTACAGGATTCCAACGGCGGGATACGAGACGTGCGGTTCAGGGGTGGAGAGTCCGCTGCAAATGAACGGGCTGCCGATCAGCGTGTACGCGCCGGAGACGGTGGGGTGCGTGGTGGTGGACGGTGAGGGAAGGTGTGCTGCTGCCACGTCGACGGGAGGGCTGATGAACAAAATGACGGGCAGGATAGGTGACTCACCACTGATCGGAGCAGGGACCTACGCGTGTGACCTGTGTGGGGTATCGTGCACAGGGGAGGGCGAGGCCATCATACGCGGGACGCTGGCGCGTGAGGTGGCGGCGGTGATGGAGTACAAAGGGCTGGGCCTCCAAGAAGCGGTGGACTTTGTGATCAAGGAGAGGCTGGACGAAGGGATGGCAGGCTTGATCGCGGTGTCCAAGAACGGTGAAGTGGCTTATGGGTTTAACTGTAACGGCATGTTCCGTGGGTGTGCCACCGAGGACGGCTTCATGGAGGTTGGAATCTGGGAATGA 1128 0.5727 MPGKEPRRFPRRLKSEIVYKTAANARPFAVVHELISCEGRDNKRGREREMGGWAIAVHGGAGVDPNLPPQRQEEAKQLLTRCLHLGISALRSNLPAIDVVELVVRELETDPLFNSGRGSALTEKGTVEMEASIMDGPKRRCGAVSGVTTVKNPISLARLVMDKSPHSYLAFGGAEQFARQQGVELVENEYFITPENVGMLKLAKEANAILFDYRIPTAGYETCGSGVESPLQMNGLPISVYAPETVGCVVVDGEGRCAAATSTGGLMNKMTGRIGDSPLIGAGTYACDLCGVSCTGEGEAIIRGTLAREVAAVMEYKGLGLQEAVDFVIKERLDEGMAGLIAVSKNGEVAYGFNCNGMFRGCATEDGFMEVGIWE 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1965 375 CDD Asparaginase_2 54 367 - -
Acco05g1965 375 Pfam Asparaginase 53 374 IPR000246 GO:0016787
Acco05g1965 375 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 53 372 IPR029055 -
Acco05g1965 375 Gene3D (Glycosyl)asparaginase 245 375 - -
Acco05g1965 375 FunFam Isoaspartyl peptidase/L-asparaginase 245 375 - -
Acco05g1965 375 PANTHER L-ASPARAGINASE 53 361 IPR000246 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1965 Acco-ChrAcco05 36007609 36010222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1965 55 335 Miscellaneous Gene Families AT4G00590 27.723 4.84e-19 85.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g1965 05 36007609 36010222 Acco10g1748 10 30679714 30681194 CCT
Acco05g1965 05 36007609 36010222 Acco05g1965 05 36007609 36010222 ECH