Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1371 ATGAATACCAAAATGATGAAGAAGCAATCATCAGATCCAGCAGATGGATCCTCCTCTGAAAGCTGGTTGGACGATGCTTGCATTCTCGACATCGATTTCTTCGTCAAAACTCTCTCACGCATTAAATCAAAAGGCGTATAACGGCCAATATGTTCGGCGTTGAGGTCGGAGCTAGAGAAGAGTATTTCACGGAAGCTCGATGAGGCTTCGTTGAAGGAACTAATGATTCCTTCTTTCAATCACACATGTGGGACATTGTTGGATGTGGATCTTGCGATTAGGTTGGTGAATGGGTTCGTGAGTTTGGATTGTGAGGGAGTGAAGAGTGGTGCTGCTTTGGTTAAGGTGGCTAAGTTAGTGGATTCGTACCTTGCCGAGGCCGCCATTGATGCCCATTTGAGCTTGTCGGAGTTCGTTGCGCTTGCCGGAGCTCTTCCTTCTCATGCGAGAACTACAGACGATGGCTTGTACAGAGCTATTGACACTTACCTTAAAGCCCAGATGGAGGCGATGACTGAGAAGAGGACGCTCGGCTTCTTCCGGTGGAAGAAACTTGCCATAATACCCACCTTTGGCAGCGGCGGCGGCTTAAGTAGGAGCGTTGAGATGAATAACAATATGAAGATGATAAGTATGAGGAGGATGGGCTCGTGGGGTTTCGGAGACAAACGCCTATGCACGTGA 684 0.481 MNTKMMKKQSSDPADGSSSESWLDDACILDIDFFVKTLSRIKSKGVXRPICSALRSELEKSISRKLDEASLKELMIPSFNHTCGTLLDVDLAIRLVNGFVSLDCEGVKSGAALVKVAKLVDSYLAEAAIDAHLSLSEFVALAGALPSHARTTDDGLYRAIDTYLKAQMEAMTEKRTLGFFRWKKLAIIPTFGSGGGLSRSVEMNNNMKMISMRRMGSWGFGDKRLCT 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1371 227 PANTHER OS12G0117600 PROTEIN 52 174 IPR043454 -
Acco09g1371 227 Pfam NPH3 family 52 175 IPR027356 -
Acco09g1371 227 ProSiteProfiles NPH3 domain profile. 1 216 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1371 Acco-ChrAcco09 29056021 29058139 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1371 55 165 EF-hand Containing Proteins AT2G47860 39.416 4.58e-21 89.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco09g1371 09 29056021 29058139 Acco07g0703 07 8721935 8725146 CCT
Acco09g1371 09 29056021 29058139 Acco09g1371 09 29056021 29058139 ECH