Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0703 ATGACGACTCTGTGCTCAGCCATGTTCGGTGAAACGAATAACCCGTCTCGGCCTGAACAACCCATGATAGAGAAATTGCCGTCGCATTTCACGACGGAATGCTGGTTCGACGACGCATGCATATTAGACATGGACTACTTCGTCAAAACCCTCTCAGGCATTAAAGCGAAAGGCGTGCGTGCTGACCTAATTGGCTCCATCATCATCCACTACGCCTCCAAATGGCTCCCCGAACTCTCCGACGGAGACGGCGGTGGCGGCATCTCTGACAAGCCTTCCGTCACTCAATTCCAAGAATCACCTGAAAGCGCGACGGCTTCGTGGATGAAGAAGCGATTCTTCGTGGAAACGCTCGTCGGAGTTCTGCCACCGGAGAAGTATTCGGTCCCTTGCAATTTCCTGCTCCGTCTTCTGAGGACAGCGAATATGGTCGGCGTGGAGGTGAATTACAAGTCGGAGCTGGAGAATAGGATATCGTGGCAGCTAGATCAGGCGTCGTTGAAGGAGATAATGATACCGTCGTTCAGTCACACATGCGAGACGCTGTTAGATGTGGAGCTAGTGATAAGGTTGGTTAAGAGATTTGTGGGGTTAGATGTTGATGGAGGGAAAAGTGGGGTGGCTCTGATGAAGGTAGCTAAGTTGGTGGATGCTTACCTGGCGGAAACCGCCGTGGATGCCAATCTGAGCTTGTCAGAGTTCGTTGCTCTCGGCGGAGCTCTTCCTCCACATTCCAGAGCTACAGATGATGGCTTGTACAGAGCTATTGACACTTATCTTAAAGCACATTCAGGGGTATCAAAGCAAGAAAGAAAAGGTCTATGTAAGCTGATAGATTGCAGGAAACTAACCCCAGAAGCCTCACTTCACGCAGCTCAGAACGAACGCTTACCTGTAAGAGCCGTGATCCAAGTCCTCTTATCCGAGCAAACAAAACTGAATTACCCCGGGGACTGGAGCGGCTCCTTCGGCGGCGGAGGCCTGAGGAGCCCCAATGGCGGCAGGGGCGATTTGCCGGCGAGGTCATTCTCGAAGCGGGAGATGCACGCGCAGCAGATGGAGATAAGGAAGCTGAAGGACGACGTTTACAGGCTTCAGAGTCAGTGCAGTGTGATGCAGGTTCAGATGGAGAAGATGATGATGGAGAAGAACAATAAGAAGGGTTTCTTCAAGTGGAAGAAGTTTGGGATTGGTGGGTTTGGTAAAAGTGTGAATGTTATGGCTTCTTCTGTGGATCATCACAAGATTCAACAAGGGGTTGTTGAAGAAGAAGATGTGTTTGAAGCTAGACAAACTCCTGTGGGCATGAAAACCAGATCGTTGTCTCGGACTCCTCATCACAAGCACTGGAGGAAATCTATGTCTTGA 1368 0.5044 MTTLCSAMFGETNNPSRPEQPMIEKLPSHFTTECWFDDACILDMDYFVKTLSGIKAKGVRADLIGSIIIHYASKWLPELSDGDGGGGISDKPSVTQFQESPESATASWMKKRFFVETLVGVLPPEKYSVPCNFLLRLLRTANMVGVEVNYKSELENRISWQLDQASLKEIMIPSFSHTCETLLDVELVIRLVKRFVGLDVDGGKSGVALMKVAKLVDAYLAETAVDANLSLSEFVALGGALPPHSRATDDGLYRAIDTYLKAHSGVSKQERKGLCKLIDCRKLTPEASLHAAQNERLPVRAVIQVLLSEQTKLNYPGDWSGSFGGGGLRSPNGGRGDLPARSFSKREMHAQQMEIRKLKDDVYRLQSQCSVMQVQMEKMMMEKNNKKGFFKWKKFGIGGFGKSVNVMASSVDHHKIQQGVVEEEDVFEARQTPVGMKTRSLSRTPHHKHWRKSMS 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0703 455 Pfam NPH3 family 34 288 IPR027356 -
Acco07g0703 455 PANTHER OS12G0117600 PROTEIN 32 407 IPR043454 -
Acco07g0703 455 ProSiteProfiles NPH3 domain profile. 33 312 IPR027356 -
Acco07g0703 455 MobiDBLite consensus disorder prediction 435 455 - -
Acco07g0703 455 MobiDBLite consensus disorder prediction 441 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0703 Acco-ChrAcco07 8721935 8725146 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0703 32 313 EF-hand Containing Proteins AT3G44820 36.093 7.78e-52 183
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco09g1371 09 29056021 29058139 Acco07g0703 07 8721935 8725146 CCT
Acco07g0703 07 8721935 8725146 Acco07g0703 07 8721935 8725146 ECH