Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0871 ATGAGGAAAGATGACCAGAAACTACATCAGGGAGGCGCAATGCCTCGGTCGGGGCGAACCAATGGATTAATTCCGAGCTCTTTTCGTGCTCTCTCAAGCTACCTGAGGGTCGTTTCCTCTGGTGCTTCCACTGTTGCGCGGTCTGCAGTATCGGCGGCTTCTTCGATTATTGATAAGGATAGTGGCGCTGACCATGATCAGGTTATCTGGGCTGGGTTTGACAAGTTAGAGGTGGAAGGAGCTGACATCCGACAAGTTCTTCTTTTGTGCTATCGAACTGGGTTCCAGATTTGGGATGTTGAGGATTCCAAAAATGTGCGTGACCTGGCTTCCAGACATGATGGTCCTGTTTCTTTTATGCAAATGCTATCAAATCCAATTGCATCAAAGAGATCAGAAGATAAGTTTGCAGACAGCCGTCCACTGTTGGTTCTTTGTACTGATGGAATTTGTGCTGGTGGCAGTAACAATAAGAATGGTTTTGCTCCCCATTGCAATGGGGGCACTTTAAACTGCCATGACCAAGTGAATGGCCTTTATCTGCCAACTACTGTTCAGTTTTATTCTTTGAGATCCCAATCATATGTAGATGTATTAAAGCTTAGATCGGCTATATATTCTGTCAGGTGCAGTTCTCGTGTTGTTGCTGTTGCTCAATCCACTCAGATACACTGTTTCAGTGCCACTACATTAGAAAGGGAATATACTCTGCTTACCAATCCAATTGTCATGAGCTTTCCTGTTTCTGGAGGTATAGGCTATGGACCACTGTCCGTCGGTCCTAGATGGCTGGCTTATAGCGGAAGCCCTGTTGTAGTCTCAAATTCTGGGCGTTTCAATCCTCAGCATTTAACACCTTCTGCAAGCTTTCCTAGTTTTTCTTCGAACGGTAGCTTGGTTGCACACTATGCCACAGAGTCCAGCAAGCAACTTGCTGCAGGGATAGTCACGCTTGGAGATATAGGGTATAAGAAGCTTTCTAGGTACTGCTCTGAGCTACGACCTGATGGCAATGTTTCTTCACCATCTGTAAATTCCAGCTGGAAGGGCAATGGAATCAGTAATGGCCATTTGAGGGATTTGGATAATATCGGAATGGTTATTGTCAAAGACATTGATAGTAAAGACGTTGTTGCTCAATTCCAAGCCCATAAAAGTCCTATTTCAGCCTTATGCTTTGATCCTAGTGGCACTATTTTAGTTACTGCATCAGTTCAGGGGCATAACATTAATGTTTTTAAGATAATGCCTGGACACTCCGACAGTTTAGCATCTGATGGTAGTTCTACACATGTTCATCTTTACAGGCTACAACGTGGCTTTACAAATGCAGTAATTCAAGATATCAGTTTCAGTGATGACAGCAACTGGATCATGGTTAGTTCCTCTAGAGGTACTAGCCATTTGTTTGGCATAAATCCTCTGGGAGGATCTGTAAATATTCAGTCCTACGATGCAAGTTTTACATCCAAAAATGGTGGATTGGGTGTTATGACTGACCCAACAGTTCAGCGGCCTCCTAATTCAAGCTTCCAAATTCCTAACCAACAAAGTTTGTGTGCAGCTGGGCCACCAGTCACACTTTCTGTTGTATGCAGAATTAGAAGTGGTAATAATGGCTGGAGAAGCACTGTAAGTGGTGCAGCCGCTGCTGCGACAGGTAGGACAAGCTTCCAGTCTGGGGTTATTGCTTCATCTTTCTGTAACGGCAAAGGGAGTGCATTGTATGTTGATGGGAACCTTATAAGGACAAAATATCACTTGTTGGTTTTTTCATCCGCCGGTTCTATGATACAATATGCTCTGGGAAAATCCATGGGTGAAGATTCATTTGTTTCTGGATTAACCCAGGCACATGAGTCTGCATTAGAGGTTGACTCAAGGTTGGTTGTTGAGGCAATTCAGAAATGGAATATATGCCAGAGACACACTAGAAGAGAACGAGAAGATAATGTAGACATATATGGTGAAAATGGAACTTTGGACAGCAACAAAATATATCCTGTAGAGATGAAGGATGAGAATATCAATAAGTCAAAACTTGAGAATATAACCATGAAAGTGAATTCTCATCCTAAGGAAGAGCGTCATTTTTCAGGAGCAGAATTTAAGACCCACCAAGCTCAAACTCCAGTGTGGGCGAAGCGAGAGATGTATTTTCATTCAATGGTGAAAGAGGAAGGCAAATTGGGTGAAGAAACTGCTTCAGAAGGGGAAATTGAGATTGAAAATATTTCAACGCATGTAATTGAAGTTAGGGCCAAGAACTTGGTTCCAATTGTTGGCTATCTTCAGCCACAAAATTCCCAAGAAACAAGGACTCCTGCTGTAAATAGTGAAGTAAATGAACCACGGCTACATCTGAATTCTGGGATTCATGAAAAAGACACAATTTCAGAGAGAGGTAACTCAGACTCTAATGACAGCGATGTTGAAGGGACGGAGTGGAATGATCATCGAGGATCACTGGAAACTAACGGCTTTGTAAATAAGAATGACAATGACACCTGGGTAGCCAATACTTGCCATGAGGTTGTAAATAATAGAGAGCACTCAAACATGGAGGCTCAACTCATGCCTGTAAATAGTGACAAAGAAGGCTTCAAAATGGAGAATCACTTTGAAGAAGACAACTTGAATTAA 2643 0.4264 MRKDDQKLHQGGAMPRSGRTNGLIPSSFRALSSYLRVVSSGASTVARSAVSAASSIIDKDSGADHDQVIWAGFDKLEVEGADIRQVLLLCYRTGFQIWDVEDSKNVRDLASRHDGPVSFMQMLSNPIASKRSEDKFADSRPLLVLCTDGICAGGSNNKNGFAPHCNGGTLNCHDQVNGLYLPTTVQFYSLRSQSYVDVLKLRSAIYSVRCSSRVVAVAQSTQIHCFSATTLEREYTLLTNPIVMSFPVSGGIGYGPLSVGPRWLAYSGSPVVVSNSGRFNPQHLTPSASFPSFSSNGSLVAHYATESSKQLAAGIVTLGDIGYKKLSRYCSELRPDGNVSSPSVNSSWKGNGISNGHLRDLDNIGMVIVKDIDSKDVVAQFQAHKSPISALCFDPSGTILVTASVQGHNINVFKIMPGHSDSLASDGSSTHVHLYRLQRGFTNAVIQDISFSDDSNWIMVSSSRGTSHLFGINPLGGSVNIQSYDASFTSKNGGLGVMTDPTVQRPPNSSFQIPNQQSLCAAGPPVTLSVVCRIRSGNNGWRSTVSGAAAAATGRTSFQSGVIASSFCNGKGSALYVDGNLIRTKYHLLVFSSAGSMIQYALGKSMGEDSFVSGLTQAHESALEVDSRLVVEAIQKWNICQRHTRREREDNVDIYGENGTLDSNKIYPVEMKDENINKSKLENITMKVNSHPKEERHFSGAEFKTHQAQTPVWAKREMYFHSMVKEEGKLGEETASEGEIEIENISTHVIEVRAKNLVPIVGYLQPQNSQETRTPAVNSEVNEPRLHLNSGIHEKDTISERGNSDSNDSDVEGTEWNDHRGSLETNGFVNKNDNDTWVANTCHEVVNNREHSNMEAQLMPVNSDKEGFKMENHFEEDNLN 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0871 880 Gene3D - 329 518 IPR015943 GO:0005515
Acco08g0871 880 MobiDBLite consensus disorder prediction 1 21 - -
Acco08g0871 880 FunFam Breast carcinoma-amplified sequence 3 293 523 - -
Acco08g0871 880 MobiDBLite consensus disorder prediction 789 819 - -
Acco08g0871 880 Pfam Breast carcinoma amplified sequence 3 523 759 IPR022175 -
Acco08g0871 880 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 17 836 IPR045142 GO:0006914
Acco08g0871 880 MobiDBLite consensus disorder prediction 789 830 - -
Acco08g0871 880 SMART WD40_4 430 471 IPR001680 GO:0005515
Acco08g0871 880 SMART WD40_4 374 414 IPR001680 GO:0005515
Acco08g0871 880 SUPERFAMILY WD40 repeat-like 184 474 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0871 Acco-ChrAcco08 7892781 7897588 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3378 01 50852343 50857642 Acco08g0871 08 7892781 7897588 CCT
Acco08g0871 08 7892781 7897588 Acco08g0871 08 7892781 7897588 ECH