Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3378 ATGAATGATGATCAGAAACCGCAGCAAGCCGGCAGTGTTCGGTCCGGTCGGGCCAATGGGTTTTTTCCCAGCTCGCTCCGGGCTATCTCCAGCTACCTCAGGGTCGTTTCGTCTGGTGCTTCCAACGTTGCTCGGTCGGCAGCATCAGCTGCGTCCACGATTGTGGATAGGGATGATGACGCCAATTCTGATCAGGTCATATGGGCTGGTTTTGATAAATTAGAGGGTGAGCGAGAAGTCACCCGTCAAGTTCTACTTCTAGGATTTCGGTCCGGCTTCCAGGTTTGGGATGTTGAAGATTCACATAATGTACATGACCTAGTTTCCAGACATGATGGTCCTGTTTCTTTTATGCAAATGTTGCCAAATCCAATTGCATCAAAGAGACCAGCAAGAAAGTTTGCTAACAGCCACCCGCTGCTAGCTGTGTGTGCTGATGGTTTCTTTGCTGGAATCAGTAACGTTCAGGACGGACTGACCACCCCTTACAATGGGAGCACTTCCAATTTCCATGAGCAATTAAATGGAAATTATCTGCCAACGACTGTTCAGTTTTATTCCATGAGATCCCAATCATATGTCCATGCACTAAAATTTAGATCAGTTGTTTATACTGTAAGGTGCAGTTCTCGAATAGTTGCTGTTTCTCAATCAACTCAGATACACTGTTTTGATGCTGCAACATTAGAAAGAGAGTATACTATACTTACCAATCCTATTGTTGCAAGTTGTCCTGGTTCTGGAGGTGTAGGCTATGGACCACTTGCTGTGGGTTCAAGATGGCTGGCTTATAGTGGAAGTCCAGTCGTAATATCTAATTCTGGGCATGTCAATCCGCAAGACTTGACAACTTCAGCAAGCTTTCCTGGTTTTTCTTCAAATGGGAGCTTGGTTGCACACTATGCCAAAGAATCAAGCAAGCAACTTGCTTCTGGAATTGTGTCCCTTGGAGATATGGGGTATAAGAAACTTTCCAGATACTACTCTGAGCTTCTGTCTGATAGCAATAGTCCATCACGATCTTTAAATTCAGGCTGGAAGGGCAATGGAACCATTAATGGACATTCAGCGGATGCTGACAACATTGGAATGGTCATTGTAAAGGATATTGTCAGTAAAAATGTAGTTACTCAACTGCGAGCCCACAAAAGTCCTATTTCAGCCTTACGCTTTGATCCCAGTGGAACCAATTTGGTGACTGCTTCAGTTCAGGGGCATAGTATAAATGTATATAAGATAATGCCTTGTCACTCAGAGGCACCTGATACTGGCCCTTCTAATGTTCATCTCTACAAGTTGCAACGTGGCTATACTAATGCAATAATACAAGATATTAGTTTCAGCGATGACAGCAATTGGATTATGATAAGTTCCTCTAGGGGCACTAGCCATATATTTGCTATAAATCCTCAGGGAGGAGCTGTGGATATTCAAGCCCTTGATTGTAGTCTTCCAACACAGAATAACGGATTGGGTGGTATTATTAGTCAAGGAGTCCTTTATCCTCATAGTTCGGCCTTGCAAATGCATAAAAAGCAGAGCCTATGTGCAACTGGGCCCCCAATCACTCTTTCTGTTGTTAGCAGAATTAGGAATGGAATTAATGGCTGGAGAGGTTCTGTGAGCGGTGCTGCTGCAGCTGCCACAGGAAAGACGAGTTCCCTTTCTGGGGCTATTGCTTCATCTTTCTGTAACTGTAAGGGCAGTGGCATGTATAATGATGGGAAGCATTCCAAGACCAAGTATCACTTGTTGGTTTTTTCATCCTCTGGTTCTATGATACAATATGCTCTACGGATGTTAAATGGTCGAGATTCAGCTATTGTTTCTGGATTAAATCCTGCTTACGAATTAGCTCCACAAGTTGATGCAAGATTAGTAGTGGAAGCTATTCAAAAATGGAATATATGTCAAAGACCATGTTTGTGGGAGCGAGAAGATAACATTGACATATATGGTGATAATGAAATTCCTGACGGCAATAAAATTTATCCTGAAGAATCGAAAGAGGACACTGTCAGTAGCCCAAAATTCAAGAATGAAGTGGTCAAAGTAAATTTCTCTTCAGAGGAAGATCGTCACCTGTATATTTCCCAAGCTGAACTGCAGATGCACCAAACTCAGACTCCATTGTGGGCAAAGTCTGAGATATATTTTCATTCAATGGTGAAAGAAGCTACCATAATAGATGAAGTAGCTGCTGCAGGGGGGGAATTTGAGATTGAAAGGATTCCAACTCGCATGATTCAAGCTAGGTCAAAACACTTAATTCCTGTTGTTGACCATCTTCAGACCCCAAAAGTTCAACAAACAAGGGCCTATGGTCTGGATGGCAGGGTAAATGAACAACTGTTACATCAGAGTACTGAGATGTCTGAAAATGGCACGATTTCAGACTGCACAACAAACTCGACTGAATTGGACAATGGCATTCAAGTACCTGGAGCACTTTAG 2454 0.4295 MNDDQKPQQAGSVRSGRANGFFPSSLRAISSYLRVVSSGASNVARSAASAASTIVDRDDDANSDQVIWAGFDKLEGEREVTRQVLLLGFRSGFQVWDVEDSHNVHDLVSRHDGPVSFMQMLPNPIASKRPARKFANSHPLLAVCADGFFAGISNVQDGLTTPYNGSTSNFHEQLNGNYLPTTVQFYSMRSQSYVHALKFRSVVYTVRCSSRIVAVSQSTQIHCFDAATLEREYTILTNPIVASCPGSGGVGYGPLAVGSRWLAYSGSPVVISNSGHVNPQDLTTSASFPGFSSNGSLVAHYAKESSKQLASGIVSLGDMGYKKLSRYYSELLSDSNSPSRSLNSGWKGNGTINGHSADADNIGMVIVKDIVSKNVVTQLRAHKSPISALRFDPSGTNLVTASVQGHSINVYKIMPCHSEAPDTGPSNVHLYKLQRGYTNAIIQDISFSDDSNWIMISSSRGTSHIFAINPQGGAVDIQALDCSLPTQNNGLGGIISQGVLYPHSSALQMHKKQSLCATGPPITLSVVSRIRNGINGWRGSVSGAAAAATGKTSSLSGAIASSFCNCKGSGMYNDGKHSKTKYHLLVFSSSGSMIQYALRMLNGRDSAIVSGLNPAYELAPQVDARLVVEAIQKWNICQRPCLWEREDNIDIYGDNEIPDGNKIYPEESKEDTVSSPKFKNEVVKVNFSSEEDRHLYISQAELQMHQTQTPLWAKSEIYFHSMVKEATIIDEVAAAGGEFEIERIPTRMIQARSKHLIPVVDHLQTPKVQQTRAYGLDGRVNEQLLHQSTEMSENGTISDCTTNSTELDNGIQVPGAL 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3378 817 MobiDBLite consensus disorder prediction 789 810 - -
Acco01g3378 817 Pfam Breast carcinoma amplified sequence 3 519 758 IPR022175 -
Acco01g3378 817 Gene3D - 80 490 IPR015943 GO:0005515
Acco01g3378 817 SMART WD40_4 190 225 IPR001680 GO:0005515
Acco01g3378 817 SMART WD40_4 426 467 IPR001680 GO:0005515
Acco01g3378 817 SMART WD40_4 372 412 IPR001680 GO:0005515
Acco01g3378 817 SUPERFAMILY WD40 repeat-like 84 469 IPR036322 GO:0005515
Acco01g3378 817 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 17 784 IPR045142 GO:0006914
Acco01g3378 817 MobiDBLite consensus disorder prediction 789 817 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3378 Acco-ChrAcco01 50852343 50857642 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3378 01 50852343 50857642 Acco08g0871 08 7892781 7897588 CCT
Acco01g3378 01 50852343 50857642 Acco01g3378 01 50852343 50857642 ECH