Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0870 ATGCAGCTGCACATATCACCAAGTTTGAGGTATGTGACAGTGCTGCCAGCAAAAGGGTTCAAAGATTTCATAAAAGTGAAGATTGCATCAGGGAAGGTGTCTTACAGGATGCTCTTCTATGTCCTCTTGCTCTTCACTTTCCTTCTTCGTTTTGTCTTTGTGTTGACTGCTATTGAATCCATTGATGGAGATTTCAAGTGCTCTACCATAGGTTGCCTGGGGAAAAAAATAGCACCAAGGATTCTGGGAAGAAAGCTCGAATCAAATGTCCCAGAAGTGATATATAAAGTATTAGATGAACCAGTTGAGAAGGATGAAGTAGAAGGAAGATCTGATATTCCACAGACTTTGGAAGACTTCATGACTGACATGAAGGAAGGTGGATATGATGCCCAAACATTTGCTACCAAACTCAGAGAAATGGTCATCCTCATGGAAAAGAGGACGAGGACAGCCAAAATCCAAGAATACCTATATCGCCATGTAGCGTCAAGCAGCATACCTAAGCAGCTTCACTGCCTTGACCTGAGTCTGGCCAGTGAACACACCAACAATGCACAAGCTCGCCTTCAGCTTCCTCCTGCAGAACTAGTCCCTGCCTTGGTTGATAACTCCTACTTCCACTTTGTTCTTGCATCTGATAATGTCCTGGCTGCTTCTGTTGTTGCCACCTCACTAGTCCGAAACTCTAGGCGACCCGGCAAGGTGGTCTTGCACATCATTACAGATAGAAAGACTTACTATCCCATGCAAGCTTGGTTCTCATTGCACCCTCTGTCACCTGCTATAATTGAGGTCAAGGCATTGCACCAATTTGATTGGTTTACAAAGGGAAAGGTGCCTGTTCTTGAAGCAATGGAGAAAGATCAACAAGTGAGGTCACAGTTCAGAGGGGGGTCATCAGCTATCGTTGCGAATAGTATTGAGAAACCACAAGTTGTTGCGGCAAAACTGCAAGCTCTAAGTCCCAAGTATAACTCCATGATGAACCACATAAGGATACATCTTCCAGAGTTGTTCCCTAGTCTCAACAAGGTAGTCTTCCTAGATGATGACATTGTCGTACAAACTGATCTTTCACCTCTGTGGGACGTTGGGATGAATGGAAAAGTAAATGGAGCAGTAGAAACATGTGCCGGAGAAGATAAGTTTGTGATGTCAAAGAGGTTGAAAAGCTATTTGAATTTCTCTCATCCCTTGATAGCCGACAACTTTGACCCTGATGAATGTGCTTGGGCTTATGGCATGAACATTTTTGATCTTGAAGCTTGGAGGAATACAAATATAAGCCTGACATACTATCATTGGGTTGAGCAGAATATAAAATCAGATCTGAGTCTTTGGCAGCTAGGGACATTACCTCCTGGATTGATAGCTTTCCATGGTCATGTCCGCTTAATTGATCCTTTCTGGCACATGCTGGGGTTGGGATATCAAGAAAACACAAGTTTTTCCGATGCTGAGAGTGCCGGTGTGATCCATTTTAATGGCAGGGCAAAGCCATGGCTAGACATAGCTTTTCCACAGCTAAGGCCCCTGTGGGCTAAATATGTCAACTTTTCAGACAAGTTCATCAAGAGCTGTAATATTCGAGCATCATAA 1602 0.4357 MQLHISPSLRYVTVLPAKGFKDFIKVKIASGKVSYRMLFYVLLLFTFLLRFVFVLTAIESIDGDFKCSTIGCLGKKIAPRILGRKLESNVPEVIYKVLDEPVEKDEVEGRSDIPQTLEDFMTDMKEGGYDAQTFATKLREMVILMEKRTRTAKIQEYLYRHVASSSIPKQLHCLDLSLASEHTNNAQARLQLPPAELVPALVDNSYFHFVLASDNVLAASVVATSLVRNSRRPGKVVLHIITDRKTYYPMQAWFSLHPLSPAIIEVKALHQFDWFTKGKVPVLEAMEKDQQVRSQFRGGSSAIVANSIEKPQVVAAKLQALSPKYNSMMNHIRIHLPELFPSLNKVVFLDDDIVVQTDLSPLWDVGMNGKVNGAVETCAGEDKFVMSKRLKSYLNFSHPLIADNFDPDECAWAYGMNIFDLEAWRNTNISLTYYHWVEQNIKSDLSLWQLGTLPPGLIAFHGHVRLIDPFWHMLGLGYQENTSFSDAESAGVIHFNGRAKPWLDIAFPQLRPLWAKYVNFSDKFIKSCNIRAS 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0870 533 CDD GT8_like_1 207 519 - -
Acco08g0870 533 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 83 530 IPR029993 GO:0047262
Acco08g0870 533 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 209 525 IPR029044 -
Acco08g0870 533 SUPERFAMILY Nucleotide-diphospho-sugar transferases 208 530 IPR029044 -
Acco08g0870 533 Pfam Glycosyl transferase family 8 210 506 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0870 Acco-ChrAcco08 7884140 7887698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0870 1 533 Glycosyltransferase AT5G54690 77.570 0.0 861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3377 01 50839795 50842881 Acco08g0870 08 7884140 7887698 CCT
Acco08g0870 08 7884140 7887698 Acco08g0870 08 7884140 7887698 ECH