Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3377 ATGCAGCTTCAAATATCACCAAGTTTAAGGCATGTGACAGTGCTTCCAGGGAAAGGGTTGAAAGAGTTTATAAAAGTGAATGTTGTATCCAGGAGAGTCTCTTATCGGATGCTCTTCTATTCGCTCTTGTTCTTCACATTACTGGTTCGCTCTGTGTTTGTGTTGACGGCAGTGGACTCCATTGATGGTGAAAACAGGTGCTCAACCATAGGTTGCCTGGGAAAGAAACTAGGACCAAGGATTATGGGAAGAAAACTAGAACCAACTGTCCCAGAAGTGATATTCCAAGTATTAGATGAGCCCCTAGACAAAGATGAGCTACAAGGAAGATCTGATATTCCGCAGACCTTAGAAGAGTTCATGACTGAAGTGAAGGAGAGTGAATATGATGCCCAGACATTTGCTGTTAAACTGCGAGAGATGGTGTCCCTCATGGAAGAAAGGACCAGGACAGCTAAAATTCAAGAATACTTATATCGTCATGTAGCATCAAGCAGCATTCCAAAACAGCTTCACTGCCTTGCCTTGAAGCTAGCGAATGAACACACTAACAATGCAGAAGCTCGCCTTCAGCTTCCTTCTGCAGAGCTTGTACCTGCCCTTGTTGACAACAACTACTTCCACTTTGTCCTTGCTTCAGACAATATTCTGGCTGCTTCTGTTGTTGCAACTTCCCTCGTGCGAAACTCATTGCGCCCACACCGGGTTGTTCTTCACATCATCACAGATAAAAAGACTTATTATCCCATGCAGGCTTGGTTTTCATTACACCCTTTATCACCTGCTATTATTGAGGTTAAGGCATTGCACCATTTTGACTGGTTTACAAAGGGAAAAGTGCCTGTTCTGGAAGCAATGGAGAAAGATCAGAAAGTGAGGTCACAGTTTAGAGGGGGATCATCAGCTATTGTTGCAAATGCTACTGAGAAGCCTAATGTTATTGCATCAAAACTGCAAGCACTTAGTCCCAAGTATAATTCAGTGATGAACCACATACGTATACATCTGCCTGAGCTATTCCCAAGTCTAAACAAGGTGGTCTTCCTGGATGATGACATTGTGGTCCAAACTGATCTTTCCCCTCTTTGGGACATTGACATGAATGGAAAAGTCAATGGTGCAGTGGAAACATGTAGCGGAGAAGATAAGTTTGTAATGTCAAAGAGGCTGAAAAACTATTTGAACTTCTCCCACCCTCTAATATCCAAGAACTTCGATCCCAATGAATGTGCTTGGGCTTATGGAATGAACATTTTTGATCTGGAGGCTTGGAGGAAGACCAACATAAGCCTTACATACCATGATTGGGTCGAGCAGAATATAAAATCAGACTTAAGTTTGTGGCAGCTAGGGACATTACCTCCCGGGTTAATAGCATTCCATGGTCACGTTCACATTATTGATTCTTTCTGGCATATGCTGGGATTGGGATATCAGGAGAATACAAGTGTTGCCGATGCAAAGAGTGCTGGTGTCATCCATTTTAATGGGCGGGCAAAGCCTTGGCTGGAGATAGCTTTTCCTCAACTAAGGCCACTGTGGGCCAAGTATATCGACTTTTCAGATAGGTTCATCAAGAACTGTCGCATTAGGGCATCATAG 1602 0.4332 MQLQISPSLRHVTVLPGKGLKEFIKVNVVSRRVSYRMLFYSLLFFTLLVRSVFVLTAVDSIDGENRCSTIGCLGKKLGPRIMGRKLEPTVPEVIFQVLDEPLDKDELQGRSDIPQTLEEFMTEVKESEYDAQTFAVKLREMVSLMEERTRTAKIQEYLYRHVASSSIPKQLHCLALKLANEHTNNAEARLQLPSAELVPALVDNNYFHFVLASDNILAASVVATSLVRNSLRPHRVVLHIITDKKTYYPMQAWFSLHPLSPAIIEVKALHHFDWFTKGKVPVLEAMEKDQKVRSQFRGGSSAIVANATEKPNVIASKLQALSPKYNSVMNHIRIHLPELFPSLNKVVFLDDDIVVQTDLSPLWDIDMNGKVNGAVETCSGEDKFVMSKRLKNYLNFSHPLISKNFDPNECAWAYGMNIFDLEAWRKTNISLTYHDWVEQNIKSDLSLWQLGTLPPGLIAFHGHVHIIDSFWHMLGLGYQENTSVADAKSAGVIHFNGRAKPWLEIAFPQLRPLWAKYIDFSDRFIKNCRIRAS 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3377 533 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 208 525 IPR029044 -
Acco01g3377 533 CDD GT8_like_1 207 519 - -
Acco01g3377 533 SUPERFAMILY Nucleotide-diphospho-sugar transferases 208 530 IPR029044 -
Acco01g3377 533 Pfam Glycosyl transferase family 8 203 506 IPR002495 GO:0016757
Acco01g3377 533 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 103 530 IPR029993 GO:0047262
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3377 Acco-ChrAcco01 50839795 50842881 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3377 1 533 Glycosyltransferase AT5G54690 79.252 0.0 877
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3377 01 50839795 50842881 Acco08g0870 08 7884140 7887698 CCT
Acco01g3377 01 50839795 50842881 Acco01g3377 01 50839795 50842881 ECH