Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0678 ATGGAACCAGTACTTCTCAGTGACAGCAATGGCTGCAGAACCAGCCATGAATGTGATATCATAACCTGGTTTGAAGAAGTGACCAAAAACGCTGGTTCTGTTCAGACTCAGATGCTATCCAAGATTCTGAAGCAGAACTATGGAGTTGAATACCTCAAGAAATGGCTCGAAAACTATAATATTCAAGACATGGATGACGACTCTGCATTGGAATCGCTTTTCACTTCCGTGGTTCCTCCGGCGTCACATGCAGATTTTGAGCCCTTTATAAAGAGAATAGCTGATGGAGACACAGCCCCTTTACTCACTCAACAATCCATAACCACCCTTTCTTTAAGTTCTGGAACCACCGAGGGGAGGCAAAAGTTTGTACCTTTCACTCACCATAGCGCACAGACTACCCTCCAAATTTTCACTTTAGCAGCAGCTTATAGATCAAAGGTTTATCCCACTAGAGAAGGAGGGAGGATTCTAGAATTCATATACAGCAGCAAGCAGTTCAAAACAAAAGGAGGCTTAACGGTAGGAACAGCAACAACGCACTACTATGCAAGCCAAGAGTTCAAGATCAAGCAAGAGAAAACAAAGTCGTTTACTTGTAGCCCGTATGAAGTAATCTCAGGAGGAGATTACAAACAGGTCACTTATTGTCACCTCCTTCTTGGCCTTTTTTACTCTGAAAAAGTAGAGTTCATTACCTCAGCTTTTGTATACAGTAGTCCAAGCCTTTCGAAACTTTGA 741 0.4251 MEPVLLSDSNGCRTSHECDIITWFEEVTKNAGSVQTQMLSKILKQNYGVEYLKKWLENYNIQDMDDDSALESLFTSVVPPASHADFEPFIKRIADGDTAPLLTQQSITTLSLSSGTTEGRQKFVPFTHHSAQTTLQIFTLAAAYRSKVYPTREGGRILEFIYSSKQFKTKGGLTVGTATTHYYASQEFKIKQEKTKSFTCSPYEVISGGDYKQVTYCHLLLGLFYSEKVEFITSAFVYSSPSLSKL 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0678 246 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 19 239 IPR004993 -
Acco08g0678 246 Pfam GH3 auxin-responsive promoter 23 239 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0678 Acco-ChrAcco08 5976394 5977476 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0678 19 236 EF-hand Containing Proteins AT1G23160 28.440 6.83e-22 92.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3505 01 51783011 51788031 Acco08g0678 08 5976394 5977476 CCT
Acco08g0678 08 5976394 5977476 Acco08g0678 08 5976394 5977476 ECH