Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3505 ATGCCCCAACACCTAGCTACCATTATTATAATGGAACCAGTTCTAACTAACCGCAATAGCAGCACTAGCTATGGCAGCAATAACAACAGCAACGATGGACAAAATATCATACTGTGGTTCGAAGAAGTAGCAGAGGAGGCAGGTTCTGTTCAGACGCAGATCTTATCCCAAATTCTGAAGCAGAACCATGGGGTGGAATATCTCAACAAATGGCTGGGGGACTACAATATTCTCGACATGGACGCTACTACATTGGAATCTCTTTTCACTTCTGTGGTTCCCCTCGCCTCTCATGAAGATTTTGAGCCTTTTATCCAAAGGATTGCAGATGGCGACACATCTCCCTTACTCACTCGACAACACACCATCAACGCTCTCTCCTTAAGTTCCGGAACCACAGAGGGAAGGCAGAAGCTTGTGCCTTTCACCCGACACAGTGCCCAAACTACCCTTCAGGTTTTCACTTTAGCAGCAGCCTATAGATCAAGGGTATATCCCATAAGAGAAGGAGGTAGGATTCTTGAATTCATATACAGCAGCAATCAGTTTCACACTAAAGGAGGCTTAAGGGTGGGAACGGCCACAACACACTATTATGCAAGCGAAGAGTTCAAAATCAAACAGGAGAGAACAAAGTCATTCACTTGCAGCCCTGATGAGGTGATTTCAGGAGGAGACTACAAGCAATCCACATACTGCCACCTCCTCCTTGGCCTCTACTTCTCTGATCAAGTAGAGTTCATCACTTCGGCCTTTGTCTATAGCATAGTGCAGGCCTTTCGCAGTTTTGAAGAACTTTGGACGGATATTTGCAGAGACATTAAAGAAGGAAGTTTGAACTCCAGAATCAAGGTGCCCAAAATGAGAAAGGCTGTTTTGAATATAATTTCCCCAAACCCATCTCTAGCTTTAAAAGTAGAAGCTGCTTGCTTGGAATTAGAAAAGGTGAATTGGTTTGATGTGATTCCTAAACTTTGGCCAAACGTTAAGTACATATATTCCATAATGACGGGGTCTATGCAACCTTATCTGAAAAAGCTAAGACATTATGCAAATAAGTTGCCATTAGTTAGTGCTGACTATGGATCTACTGAGAGCTGGATTGGGGTTAACGTGGATCCTAGTTTACCTCCGGAGAATGTAACATATGCCGTCGTACCTACTTTCTCTTACTTTGAGTTCATACCCCTCCATAGACAGAAGCAAGGTTGTACTTCAGTTGCTGATGATTTCAGGGAGGATTTGCCTATTCCACTATCGCAAGTTAAGGTTGGACAAGAGTACGAAATAGTCCTCACAACTTTCACTGGACTGTATAGGTGCAGGCTAGGGGATGTGGTGGAAGTAGGGGGATTTCACAAGGGGACCCCAAAGTTGAACTTCATATGCAGAAGGAAGCTAATACTGACAATAAACATAGACAAGAACACGGAGAGAGACCTACAGCAAGTGGTGGAAAGAGGATCGGATCTGCTGAACAAGGAGGAAGCAGAGGTGGAGGACTTCACCAGCTACGCAGACGTGTCGAATCCACCAGGGCACTACGTCATATACTGGGAGATCAAAGGCCATGTGGATGACAAACTCCTTCATAGCTGTTGCACCCACATGGATGCGTCCTTCGTCGACCCTGGCTACGTGGTGTCCCGCAAGACCCGCGCCATTGGCCCCCTCGAACTCCGAGTCGTCCAGAGAGGCACCTTCAAGAGAATTCTCGACCACTTCGTCGCCAGTGGGGGCGCCCTCGGCCAGTTCAAGACCCCCAGGTGCACCACTAACCCTGGCCTCCTCAATATCCTCTCTGCCTCCACCATTAGGACCTTTCGCAGCACTGCCTATGCTTAG 1845 0.4672 MPQHLATIIIMEPVLTNRNSSTSYGSNNNSNDGQNIILWFEEVAEEAGSVQTQILSQILKQNHGVEYLNKWLGDYNILDMDATTLESLFTSVVPLASHEDFEPFIQRIADGDTSPLLTRQHTINALSLSSGTTEGRQKLVPFTRHSAQTTLQVFTLAAAYRSRVYPIREGGRILEFIYSSNQFHTKGGLRVGTATTHYYASEEFKIKQERTKSFTCSPDEVISGGDYKQSTYCHLLLGLYFSDQVEFITSAFVYSIVQAFRSFEELWTDICRDIKEGSLNSRIKVPKMRKAVLNIISPNPSLALKVEAACLELEKVNWFDVIPKLWPNVKYIYSIMTGSMQPYLKKLRHYANKLPLVSADYGSTESWIGVNVDPSLPPENVTYAVVPTFSYFEFIPLHRQKQGCTSVADDFREDLPIPLSQVKVGQEYEIVLTTFTGLYRCRLGDVVEVGGFHKGTPKLNFICRRKLILTINIDKNTERDLQQVVERGSDLLNKEEAEVEDFTSYADVSNPPGHYVIYWEIKGHVDDKLLHSCCTHMDASFVDPGYVVSRKTRAIGPLELRVVQRGTFKRILDHFVASGGALGQFKTPRCTTNPGLLNILSASTIRTFRSTAYA 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3505 614 Pfam GH3 auxin-responsive promoter 39 593 IPR004993 -
Acco01g3505 614 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 33 613 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3505 Acco-ChrAcco01 51783011 51788031 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3505 40 611 EF-hand Containing Proteins AT1G23160 34.753 2.14e-116 357
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3505 01 51783011 51788031 Acco08g0678 08 5976394 5977476 CCT
Acco01g3505 01 51783011 51788031 Acco01g3505 01 51783011 51788031 ECH