Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0513 ATGTATTATGTATTTCGACCCCAAGCTGAAGCTAGCCTTCTTCTCTCTCAGGTCCCTGATTCCTGCCTATTCTCTCCCACCGTCGCCATGGATCGTCGCATCCATGGCGTCACCACGATTTGCATCTCTCTTCTCCTTCTTTTCTCCGGCTTCCCCTTTCTCGCATTCTCCGATTCTCAAAATCCCAGATTGTCGGTGGCTTCTTCTTCCTCGGGTCAGATAAACTCCAACTCAGTTCTGGTGGCTCTTCTGGACTCGCATTACACGGAACTCGCCGAGCTGGTCGAGAAGGCCATGCTTCTGCAGACTCTCGAAGACACTGTCGGTGCCCACAACATCACCATCTTCGCACCCAGAAACGAAGCTCTCGAGCGCGATCTCGACCCTGAGTTCAAGCGCTTCCTTCTTGAACCCGGTAATCTCAAGTCTCTTCAGTCTTTGCTCATGTTCCATATCATTCCCACTCGAATGGGGTCGCAGGCGTTGCCTTCTCAAACCGGGTCAGCTCGTCACGAGACGCTCTTTAAGTCCGAGTTCATTCACCTTGCCAATAATGGGACCGGGGAATGGACAGTGGATCACGCCAAGATTATTCACCCTGATGTTGTCTCCCGACCCGATGGAGTGATCCACGGGATTGAGCGCCTCCTGGTCCCTCGTTCCGTCCAAGATGACTTCAACCGCCGGCGGAGTCTTCAGTCCATTACGGCGGTGAAGCCCGAGGGAGCACCGGAGGTTGACCCAAGGACGCATCGGCTCAAGAAGCCAGCTCCGCCTGTTAAACCAGGTTCGCCGCCGGTTTTGCCCATTTACGATGCCATGGCTCCGGGACCCTCTCTGGCGCCCGCCCCAGCTCCCGGTCCCGGTGGACCACACCACCATTTCAACGGTGAAGCACAGGTCAAGGATTTCATTCAGACACTGCTTCATTATGGTGGGTACAATGAAATGGCCGACATTTTGGTGAATCTGACTTCCTTAGCTACCGAAATGGGTCGGTTGGTGTCTGAGGGCTATGTCCTAACTGTTTTGGCTCCGAACGATGAAGCTATGGCTAAACTAACCACGGACCAGCTGAGTGAACCGGGTGCTCCGGAGCAGATAATGTACTACCATCTAATACCCGAATATCAAACCGAAGAGAGTATGTATAATTCAGTTCGAAGGTTCGGAAAAGTCCGGTATGATACTCTCCGGTTGCCGCATAAGGTGGTCGCTCAGGAGGCAGACGGGTCGGTCAAGTTCGGGCAGGGAGACGGGTCGGCTTATTTGTTCGACCCCGATATATACACGGACGGTCGTATCTCGGTTCAGGGTATCGATGGGGTTTTGTTCCCATCAGAGGAGGAGGAAAAGCCGGTGACCCGGACGGTTCAACCCGCCAAAGTCGTGGTCAAGCATAGAAGAGGAAAATTGCTGGAAGCTGCTTGCTGGATGCTTGGGACCTTTGGACAGGACTCTAGATTCACCACTTGCCATTGA 1482 0.5358 MYYVFRPQAEASLLLSQVPDSCLFSPTVAMDRRIHGVTTICISLLLLFSGFPFLAFSDSQNPRLSVASSSSGQINSNSVLVALLDSHYTELAELVEKAMLLQTLEDTVGAHNITIFAPRNEALERDLDPEFKRFLLEPGNLKSLQSLLMFHIIPTRMGSQALPSQTGSARHETLFKSEFIHLANNGTGEWTVDHAKIIHPDVVSRPDGVIHGIERLLVPRSVQDDFNRRRSLQSITAVKPEGAPEVDPRTHRLKKPAPPVKPGSPPVLPIYDAMAPGPSLAPAPAPGPGGPHHHFNGEAQVKDFIQTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYHLIPEYQTEESMYNSVRRFGKVRYDTLRLPHKVVAQEADGSVKFGQGDGSAYLFDPDIYTDGRISVQGIDGVLFPSEEEEKPVTRTVQPAKVVVKHRRGKLLEAACWMLGTFGQDSRFTTCH 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0513 493 SMART fasc_3 114 220 IPR000782 -
Acco08g0513 493 SMART fasc_3 342 447 IPR000782 -
Acco08g0513 493 Gene3D FAS1 domain 294 447 IPR036378 -
Acco08g0513 493 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 35 490 IPR044654 -
Acco08g0513 493 ProSiteProfiles FAS1/BIgH3 domain profile. 301 429 IPR000782 -
Acco08g0513 493 MobiDBLite consensus disorder prediction 239 266 - -
Acco08g0513 493 Gene3D FAS1 domain 79 220 IPR036378 -
Acco08g0513 493 ProSiteProfiles FAS1/BIgH3 domain profile. 75 217 IPR000782 -
Acco08g0513 493 Pfam Fasciclin domain 87 219 IPR000782 -
Acco08g0513 493 Pfam Fasciclin domain 326 446 IPR000782 -
Acco08g0513 493 SUPERFAMILY FAS1 domain 78 220 IPR036378 -
Acco08g0513 493 SUPERFAMILY FAS1 domain 280 447 IPR036378 -
Acco08g0513 493 FunFam Fasciclin-like arabinogalactan protein 16 296 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0513 Acco-ChrAcco08 4122161 4126439 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3608 01 52470892 52476740 Acco08g0513 08 4122161 4126439 CCT