Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3608 ATGTTATTAAATGCAATTCTGTTTGACCTCACCAATGTTGAGTTGTCGTCACTAAGGACAGAAACAGCTAACATGGGTGGCACAAACCTCTTGCTCCCTCGTGCTGCGCTGTCTAGCTCTCCCAGGCCTCAACTCGTCCACTCCGCCGCATTCTCTCAAGTCGCCATGGTTTGTCGCATCTATGGCGTCGCCAAGCTCCGCACCTTCCTTCTTCTTCTTCTTCTTTTTGTTTTCCGGCTCGCATTGTCGGAAATGCCAAATCCCAGGTCGTCGGTCTCTTCTTCGGTGAGCTCTGGTCAGATAAACTCCAACTCGGTTCTGGTGGCTCTTCTGGATTCACATTACACGGAACTCGCTGAGCTTGTGGAGAAGGCTATGCTCTTGCAGACTCTGGAGGATACTGTCGGCAGCCACAATATCACCATCTTCGCTCCCAGAAATGAAGCTCTCGAACGCGATCTCGACCCGGAGTTCAAGCGCTTCCTTCTCGAACCCGGCAATCTCAAGTCTCTCCAGACATTACTCATGTTCCATATCATTCCGACCAGAATCGGATCGCAGCAGCTTCTGACTCGGAACGGGTTGACCCGTCACGATACGCTTTCCAATGACCACCTGCATCTTGAGAACAATGGGACTACGGAATGGACGGTGGATCGCGCCAAGATTATCCAACCTGACGCGGTGACCCGACCCGATGGCGTCATCCACGGGATTGAGCGCCTCTTGGTGCCCCGTTCCGTGCAAGACGACTTCAACCGCCGGCGAAGCCTGCAGTCTATCACGGCGGTGAAGCCAGAGGGAGCACCGGAAGTGGACCCGAGGACTCATAGGCTCAAGAAACCCGCCCCACCTGCGAAACCCGGTTCTCCTCCTGCTTTGCCAATCTCCGATGCAATGGCTCCTGGACCCGCACTAGCTCCTGCTCCAGCGCCCGGACCAGGCGGAGCCCGCCACCACTTCAACGGTGAAGCCCAGGTGAAGGATTTTATCCAGACACTGCTCCATTACGGCGGGTACAATGAAATGGCGGATATATTGGTGAATCTGACATCGCTAGCCACCGAAATGGGTCGACTAGTCTCCGAGGGGTACGTGCTCACCGTTTTGGCTCCTAATGATGAGGCCATGGCTAAATTGACTACCGACCAATTGAGTGAACCAGGTGCACCGGAACAGATTATCTATTACCATCTCATACCGGAGTATCAAACCGAAGAGAGTATGTACAATGCAGTTCGACGGTTCGGTAAGGTCCGGTATGATACTCTACGGTTGCCACATAAGGTGGTGGCTCAGGAGGCAGATGGATCAGTGAAATTCGGGCAGGGAGACGGGTCGGCGTATTTGTTCGACCCGGATATCTATACGGATGGGCGGATCTCGGTTCAGGGCATCGATAACGTATTGTTCCCACTGGAGGAGGAGACGAAGCCCATTAACAGAACGGTTCAACCCGCTAAGGTTGTGGTCAAGCACAGAAGAGGAAAGTTGCTGGAGGCAGCGTGTTGGGTGCTTGGAACCATTGGGCAACATGGTAGATTCACCACTTGCCACTAA 1560 0.5365 MLLNAILFDLTNVELSSLRTETANMGGTNLLLPRAALSSSPRPQLVHSAAFSQVAMVCRIYGVAKLRTFLLLLLLFVFRLALSEMPNPRSSVSSSVSSGQINSNSVLVALLDSHYTELAELVEKAMLLQTLEDTVGSHNITIFAPRNEALERDLDPEFKRFLLEPGNLKSLQTLLMFHIIPTRIGSQQLLTRNGLTRHDTLSNDHLHLENNGTTEWTVDRAKIIQPDAVTRPDGVIHGIERLLVPRSVQDDFNRRRSLQSITAVKPEGAPEVDPRTHRLKKPAPPAKPGSPPALPISDAMAPGPALAPAPAPGPGGARHHFNGEAQVKDFIQTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIIYYHLIPEYQTEESMYNAVRRFGKVRYDTLRLPHKVVAQEADGSVKFGQGDGSAYLFDPDIYTDGRISVQGIDNVLFPLEEETKPINRTVQPAKVVVKHRRGKLLEAACWVLGTIGQHGRFTTCH 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3608 519 SMART fasc_3 368 473 IPR000782 -
Acco01g3608 519 SMART fasc_3 141 246 IPR000782 -
Acco01g3608 519 ProSiteProfiles FAS1/BIgH3 domain profile. 102 243 IPR000782 -
Acco01g3608 519 MobiDBLite consensus disorder prediction 265 315 - -
Acco01g3608 519 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 61 516 IPR044654 -
Acco01g3608 519 FunFam Fasciclin-like arabinogalactan protein 16 322 473 - -
Acco01g3608 519 SUPERFAMILY FAS1 domain 306 473 IPR036378 -
Acco01g3608 519 MobiDBLite consensus disorder prediction 284 298 - -
Acco01g3608 519 Pfam Fasciclin domain 114 245 IPR000782 -
Acco01g3608 519 Pfam Fasciclin domain 353 472 IPR000782 -
Acco01g3608 519 Gene3D FAS1 domain 106 246 IPR036378 -
Acco01g3608 519 ProSiteProfiles FAS1/BIgH3 domain profile. 327 455 IPR000782 -
Acco01g3608 519 Gene3D FAS1 domain 346 472 IPR036378 -
Acco01g3608 519 SUPERFAMILY FAS1 domain 106 246 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3608 Acco-ChrAcco01 52470892 52476740 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3608 01 52470892 52476740 Acco08g0513 08 4122161 4126439 CCT