Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0438 ATGGAGATCGGATGGCCGACTAAGGTGCGCCATGTAGCGCACGTCACATTTGATAGATTCAATGGTTTCTTGGGTTTGCCTGACGAATTCGAACCTGAAGTGCCCAGAAGGCCTCCCAGTGCCAGTGCAACTGTCTTTGGAGTTTCAACAGAATCCATGCAGCTATCGTTTGACTCCAGAGGAAACAGTGTGCCAACCATCCTGTTATTAATGCAAAGTCGCCTGTATAGTGAAGGAGGTTTGCAGGCAGAGGGCATATTCAGAATAAATGCAGAAAATAGTCAAGAGGAATATGTTAGGGAGCAATTAAATAGGGGAGTTGTCCCTGAAGGAATTGATGTCCATTGCTTAGCAGGACTTATCAAGGCTTGGTTTAGGGAACTGCCAATAGGCATTCTGGATTCCTTATCACCTGAGCAGGTAATGAATAGTCAAACTGAAGAAGAATGTGCAGAACTAGCAAGGAATCTACCTCCCACTGAAGCTTCCCTCTTGGACTGGGCAATCAATCTCATGGCTGACGTTGTCCAACATGAACGTCTCAATAAGATGAATGCACGCAACATTGCAATGGTTTTTGCCCCAAACATGACTCAGATGGCAGACCCTTTGACTGCATTGATGTATGCAGTTCAAGTGATGAACTTCTTGAAGACACTGATACTAAGGACACTGAAGGAAAGAAAGGATTCTATAGTAGAATCTTCACCTGGACCTGGCTTTTATTTAGAGCCCTCTGATGATAATAATAGTCACCAAAGCCCTATAATACAGTTATGCCAGCCAGATTCTGCCAAAGATAATGAAGAGGCTCAGGCCCTTACAACTGAAAAAACTGTCTCAGAAAGTAACACTGCCCCTGATTCCCTCCAAGAGACAACTAACTTAACTGAAGGACAATCTGGGAGTTTAGGAACCTCTTCTGAAAACCCAATATGTAATGAGGATTTGTATTGTGAGTATCCATCAAAAGAAAATGTTGGGAAGAGCAAGACAGGCCAATCAAGCAAGTCAAATTCAAGAAAGGGATCGAAGAAAATCAGAGACCAGCAACATTCAAACCATCAAGGAACAATGACTGTTGAGAAAACTAAGGGAAATGGTAAAATGAGTCGCATAAATTCAAAATCTGAGAAGGCAGAACCATGGAGGTGA 1155 0.4294 MEIGWPTKVRHVAHVTFDRFNGFLGLPDEFEPEVPRRPPSASATVFGVSTESMQLSFDSRGNSVPTILLLMQSRLYSEGGLQAEGIFRINAENSQEEYVREQLNRGVVPEGIDVHCLAGLIKAWFRELPIGILDSLSPEQVMNSQTEEECAELARNLPPTEASLLDWAINLMADVVQHERLNKMNARNIAMVFAPNMTQMADPLTALMYAVQVMNFLKTLILRTLKERKDSIVESSPGPGFYLEPSDDNNSHQSPIIQLCQPDSAKDNEEAQALTTEKTVSESNTAPDSLQETTNLTEGQSGSLGTSSENPICNEDLYCEYPSKENVGKSKTGQSSKSNSRKGSKKIRDQQHSNHQGTMTVEKTKGNGKMSRINSKSEKAEPWR 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0438 384 PANTHER MKIAA1688 PROTEIN 1 351 IPR044785 GO:0005096
Acco08g0438 384 MobiDBLite consensus disorder prediction 232 311 - -
Acco08g0438 384 CDD RhoGAP 65 221 - -
Acco08g0438 384 FunFam Rho GTPase-activating protein 5 33 226 - -
Acco08g0438 384 CDD CRIB 1 41 - -
Acco08g0438 384 SMART PBD_5 3 37 IPR000095 -
Acco08g0438 384 MobiDBLite consensus disorder prediction 274 311 - -
Acco08g0438 384 MobiDBLite consensus disorder prediction 246 261 - -
Acco08g0438 384 Gene3D CRIB domain 1 33 IPR036936 -
Acco08g0438 384 MobiDBLite consensus disorder prediction 324 384 - -
Acco08g0438 384 Gene3D Rho GTPase activation protein 36 233 IPR008936 -
Acco08g0438 384 ProSiteProfiles Rho GTPase-activating proteins domain profile. 48 233 IPR000198 GO:0007165
Acco08g0438 384 SMART RhoGAP_3 62 225 IPR000198 GO:0007165
Acco08g0438 384 Pfam RhoGAP domain 65 199 IPR000198 GO:0007165
Acco08g0438 384 SUPERFAMILY GTPase activation domain, GAP 43 222 IPR008936 -
Acco08g0438 384 MobiDBLite consensus disorder prediction 353 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0438 Acco-ChrAcco08 3484458 3488337 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3653 01 52821193 52824358 Acco08g0438 08 3484458 3488337 CCT
Acco08g0438 08 3484458 3488337 Acco08g0438 08 3484458 3488337 ECH