Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3653 ATGACCGAGGTCCTCCACTCTTCATCGCATTTCTTTTCCTCTTCGTCTTCCCTGTCGCGTAGGCCCCTATCTCCACCGTCTTGTGCAACCCCTCCCGGCGATGACATTTTCACTACTGGTGATCAAGAACCTCCCTCGCCGTCTTCGCTAGCCGTGGAGGGCTGTTCGACGGCGGCGGACTGCGACACTGAGGAGCGGAACAAGCGCCGGACGGAACAGCTTTCTGTTTTGGCGCTTGGTGCGGCCCTTTTCAGGAAATCATTGCTTTCTTGTAAGAGTGGTGGGAGGGAGGTTTGCGCAATGGAGATCGGACGGCCTTCCAATGTGCGCCATGTTGCGCATGTCACGTTTGATAGGTTCAATGGTTTCTTGGGTTTGCCTGACGAGTTCCAAACTGAAGTGACCAGAAGGCCCCCTAGTGCTAGTGCAACTGTTTTTGGAGTTTCAACAGAATCCATGCAGTTATCATATGACTCAAGAGGGAACATTGTGCCAACAATTCTGTTACGAATGCAAAAACGCTTATATACGCAAGGAGGGTTGCAGGCAGAAGGGATTTTCAGAATCAATGCAGAAAATAGTCAAGAGGAATATGTTAGGGACCAATTAAATAGTGGAGTGGTCCCACAGGGTGTTGATGTGCATTGTTTGGCGGGGCTTATCAAGGCTTGGTTTCGAGAGCTGCCTAGGGGTGTTCTGGATTCTTTATCCCCCGAGCAGGTAATGCAATGCCAGACAGAGGAGGAATGTGCTGAACTAGTGAGGCATCTACCTTCCACTGAAGGTGCCCTCTTGGACTGGGCCATCAATCTGATGGCTGATGTTGTACTACAGGAACATCTAAACAAGATGAATGCACGCAACATTGCCATGGTTTTTGCGCCGAACATGACTCAGATGGCAGATCCTTTAACTGCATTGATGTTCGCAGTCCAAGTGATGAATTTCTTAAAGACGCTTGTACTAATGACCCTCCAAGAAAGAAAGAATTTGTTGAGAGAATCTCCTCCTCAATCTCATCAAGAGCCTTCGGATGAGAATGGACACCATAGCCCTTTGCAATCCTGCCAGCGATATTCTAATGGAGAAAGTGAAGATGCACAGGAAAACTTCTTTTCTGATAAAACTATCCAAGAATGTTCCCCTTACTCTCCTCATCAAAGCATTAACCTAACTGGAGAAAAATCTGGCAGTTTGTTAACCTCTCCTGAGCATCTAGACTATAGAGGTTTATGTTGCAAGTTTTCGCCCAAAGGAAACGCCAGGAAGAGCAAGACTGGCCGACCAAGTGGTCCAAATACTAGAAGGAAGAGTAGAAAAGAGAAGAGGGGGATTAGCAATCTGAGTCGGTTGGTTTCAAGATCTGAGAGGATAGAAGCCTGGAGGTGA 1389 0.4773 MTEVLHSSSHFFSSSSSLSRRPLSPPSCATPPGDDIFTTGDQEPPSPSSLAVEGCSTAADCDTEERNKRRTEQLSVLALGAALFRKSLLSCKSGGREVCAMEIGRPSNVRHVAHVTFDRFNGFLGLPDEFQTEVTRRPPSASATVFGVSTESMQLSYDSRGNIVPTILLRMQKRLYTQGGLQAEGIFRINAENSQEEYVRDQLNSGVVPQGVDVHCLAGLIKAWFRELPRGVLDSLSPEQVMQCQTEEECAELVRHLPSTEGALLDWAINLMADVVLQEHLNKMNARNIAMVFAPNMTQMADPLTALMFAVQVMNFLKTLVLMTLQERKNLLRESPPQSHQEPSDENGHHSPLQSCQRYSNGESEDAQENFFSDKTIQECSPYSPHQSINLTGEKSGSLLTSPEHLDYRGLCCKFSPKGNARKSKTGRPSGPNTRRKSRKEKRGISNLSRLVSRSERIEAWR 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3653 462 SMART PBD_5 103 137 IPR000095 -
Acco01g3653 462 CDD CRIB 101 134 - -
Acco01g3653 462 Pfam P21-Rho-binding domain 102 131 IPR000095 -
Acco01g3653 462 CDD RhoGAP 165 320 - -
Acco01g3653 462 Pfam RhoGAP domain 165 299 IPR000198 GO:0007165
Acco01g3653 462 MobiDBLite consensus disorder prediction 332 368 - -
Acco01g3653 462 ProSiteProfiles Rho GTPase-activating proteins domain profile. 148 332 IPR000198 GO:0007165
Acco01g3653 462 MobiDBLite consensus disorder prediction 414 449 - -
Acco01g3653 462 PANTHER MKIAA1688 PROTEIN 1 374 IPR044785 GO:0005096
Acco01g3653 462 MobiDBLite consensus disorder prediction 1 24 - -
Acco01g3653 462 SUPERFAMILY GTPase activation domain, GAP 143 321 IPR008936 -
Acco01g3653 462 MobiDBLite consensus disorder prediction 333 347 - -
Acco01g3653 462 MobiDBLite consensus disorder prediction 1 53 - -
Acco01g3653 462 Gene3D Rho GTPase activation protein 132 334 IPR008936 -
Acco01g3653 462 FunFam Rho GTPase-activating protein 5 133 326 - -
Acco01g3653 462 MobiDBLite consensus disorder prediction 429 443 - -
Acco01g3653 462 ProSiteProfiles CRIB domain profile. 103 116 IPR000095 -
Acco01g3653 462 SMART RhoGAP_3 162 322 IPR000198 GO:0007165
Acco01g3653 462 MobiDBLite consensus disorder prediction 348 368 - -
Acco01g3653 462 Gene3D CRIB domain 100 131 IPR036936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3653 Acco-ChrAcco01 52821193 52824358 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3653 01 52821193 52824358 Acco08g0438 08 3484458 3488337 CCT