Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0412 ATGGAGTTGGCAAGAATACCACAGTTTCTTGGGGGAAAGACTATATTGGTGACCGGTGCAACTGGCTTCTTAGCAAAAGTATTTGTGGAGAAGTTATTAAGGATTCAGTCAGATTTGAAGAAATTGTATCTTCTTCTCAGAGCTTCTGACCACGAGGCCGCCACACAACGCATGCATGATGAGATTTTAGGGAAGGACTTGTTTAGAGTTCTACGAGAAAAGTGGGTCGAAGATTTTGAATCTTTGATAGCAGAGAAGGTAGTTGCGGTTGCAGGAGACGTTTCTGCGGCAAATTTGAGAATTGAAAATCAAAATCTTGAAATGATGTGGGAAGAAATAGACATCATTGCCAATTTCGCTGCAAATACCAATTTTGATGAAAGATTTGACACCGCTATGGAGATTAACACGATGGGAGCTTTACATGTGTTAAACTTTGCCAAGAGTTGCCGTAGGATCCAGGTTTTTCTTCACATATCAACTGCTTATGTTTGTGGAGAGCCTAAGGAAGGAGAAGTGATTAGAGAGGAACCTTTTAGGATGGGTCAAACCCTAAACGGGGCCTCAAAATTATTTGACATTCACGCAGAGAAGAGTTTGATGCAAACAACAATTGAACAACTCAGATCACAATATACCGACAACGACATGGCTATTACGTCCGTGATGAAAGATTTTGGAATTAAAAGAGCAAACTTGTATGGATGGCCAAACACATACGTATTCACAAAAGCAATGGGAGAGATGCTGCTGTCACATTTTAGGAATGAGATTCCATTAATTATTATCAGGCCTACCATGATCACAAGTACGTACAAGGAACCCTTCCCTGGTTGGATTGAAGGTTTGAGAACACTTGATGCTGTAGTTGGCGGCTTTGGTAAAGGAAAAGTAGAATGCTTTCTGGGTCATCCCCAGGCAATTTTAGATGCGATACCAGCGGATATGGTGACAAACTGTATTATATCTGGTGAACCAAGTGTTTTGCTGGATCTTCAAGATGTTTATAATCGAAATGATAGAAAAGTCAAAATGGTGATTCGAATGGTCGGACTCTACAAACCCTATGTATTTTTGAAGGCATTCTTTGATGATACGAACACAGAAGAGTTACGAGAAAAATCAAAGATTCCAAAGGATGTTGGATTTGACTTAGAGTTTGATCCGAAGAGCGTAGATTGGAGAGACTATTTGATGAACGTCCACTTTCCAGGCCTCGTCAACTACGCAATTAATTCGTCTTCAAATTTGTCTAAACACTGA 1263 0.4014 MELARIPQFLGGKTILVTGATGFLAKVFVEKLLRIQSDLKKLYLLLRASDHEAATQRMHDEILGKDLFRVLREKWVEDFESLIAEKVVAVAGDVSAANLRIENQNLEMMWEEIDIIANFAANTNFDERFDTAMEINTMGALHVLNFAKSCRRIQVFLHISTAYVCGEPKEGEVIREEPFRMGQTLNGASKLFDIHAEKSLMQTTIEQLRSQYTDNDMAITSVMKDFGIKRANLYGWPNTYVFTKAMGEMLLSHFRNEIPLIIIRPTMITSTYKEPFPGWIEGLRTLDAVVGGFGKGKVECFLGHPQAILDAIPADMVTNCIISGEPSVLLDLQDVYNRNDRKVKMVIRMVGLYKPYVFLKAFFDDTNTEELREKSKIPKDVGFDLEFDPKSVDWRDYLMNVHFPGLVNYAINSSSNLSKH 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0412 420 CDD FAR-N_SDR_e 13 322 - -
Acco08g0412 420 Pfam Male sterility protein 17 321 IPR013120 -
Acco08g0412 420 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 322 IPR036291 -
Acco08g0412 420 Gene3D - 7 350 - -
Acco08g0412 420 PANTHER MALE STERILITY PROTEIN 2-RELATED 331 413 IPR026055 GO:0080019
Acco08g0412 420 Pfam Male sterility protein 337 412 IPR033640 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0412 Acco-ChrAcco08 3234058 3237501 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0412 8 324 Acyl Lipid Metabolism Gene Families AT5G22500 55.172 1.53e-123 362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3672 01 52963384 52966225 Acco08g0412 08 3234058 3237501 CCT