Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3672 ATGGAGTTAGAAAGCATACTCCAATTCCTTCAGGACAAGACCATTTTAGTGACTGGTGCCACTGGCTTTCTCGCCAAAATTTTTGTGGAGAAGGTACTGAGGGTTCAGCCAAATGTCAAGAAATTTTACCTTCTTCTGAGAGCCACCGATAACATATCTGCCACACACCGCTTGAATAATGAGATCACAGGAACAGCGTTGTTCAAATTGTTGAAGGAAAGTCATGGTGCAGAGTTCAATTCCTTTATGTCAAAGAAGGTGACTCTGGTTCCTGGGGACATCTCTCTCGAGGACTTGAATCTCAAGGACTCCGTTCTAAGGGAAGAGATCTGCGGACAAACAGATGTTATAGTAAACTTAGCTGCAACCACTAACTTTGATGAAAGATATGATGTTGCACTGGGTATAAATAGCATGGGAGCTAAGCATGTTTTGAGTTTCGCCAAAAAATGTACTAAACTGAAAGTGCTTGTCCACGTCTCAACAGCATATGTATGTGGGGAGAAAGGAGGGCTAATAGCAGAGGAAGCGTATAAAATGGGGGCGACACTAAATGGAGTGTCAGGACTAGACATTGACGCTGAAACGAAGTTGGCGCAAGAAACTCTGAAACTGCTTCAAGAGGAGGGAGCCACAGAATATGAAATTAAAGCCGCCATGAAGGACTTGGGTCTTAAAAGGGCAAATATATACGGATGGCCAAACACGTACGTGTTCACGAAGGCACTGGGAGAAATGCTTGTGGGAGCATTAAAGGGAAATCTGCCTGTTGTCATCATACGTCCCACCATCGTTACCAGCACTTATAAGGAACCTTTTCCTGGTTGGGTTGAAGGTGTAAGAACCATAGACAGTATGATAGTTGCATATGGCAAAGGAAAACTAAGCTGTTTTCCAGCGGACATCGACACAATTTTTGACGCGATACCAGCCGACATGGTAGTGAATGCTATGTTAGTGGCAATGGCGGCTCATGCGAATGAAGCAGAAGGTATAATATATCACGTGGGTTCCTCCATGAGGAATCCAGTGAGATACTCCAATCTTAGAGACTATAGCTTCAGATACTTCACATCGAAGCCACTTAGGAACAAGGACGGCAAAATTATCAAAGTCGGCAATGTTACCGTATTAAACAGCATGGATAGCTTTCGCACATACATGTTCATTCGCTATATTCTCCTCTTGAAGGGACTAGAGCTGGCCAATAAAGCTTTTTGTCAGTACTTTCGCGGGAAGTATCTTGACCTCAACAGGAAGATTCAGATAGTGATGCGCTTGGTTGATCTTTACAGGCCTTACTTGTTCTTCAATGGCGTATTTGATAATATGAACACAGAGAAGTTGAGAGTGGCAGCGACACAGGGTGGGGTAGAGATGGATATGTTCTATTTTGACCCAAAGATGATTGACTGGGAGGATTATTTCATGAACACACATATCAGTGGCATCATTAAATACGTCCTCAAGTGA 1473 0.4331 MELESILQFLQDKTILVTGATGFLAKIFVEKVLRVQPNVKKFYLLLRATDNISATHRLNNEITGTALFKLLKESHGAEFNSFMSKKVTLVPGDISLEDLNLKDSVLREEICGQTDVIVNLAATTNFDERYDVALGINSMGAKHVLSFAKKCTKLKVLVHVSTAYVCGEKGGLIAEEAYKMGATLNGVSGLDIDAETKLAQETLKLLQEEGATEYEIKAAMKDLGLKRANIYGWPNTYVFTKALGEMLVGALKGNLPVVIIRPTIVTSTYKEPFPGWVEGVRTIDSMIVAYGKGKLSCFPADIDTIFDAIPADMVVNAMLVAMAAHANEAEGIIYHVGSSMRNPVRYSNLRDYSFRYFTSKPLRNKDGKIIKVGNVTVLNSMDSFRTYMFIRYILLLKGLELANKAFCQYFRGKYLDLNRKIQIVMRLVDLYRPYLFFNGVFDNMNTEKLRVAATQGGVEMDMFYFDPKMIDWEDYFMNTHISGIIKYVLK 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3672 490 PANTHER MALE STERILITY PROTEIN 2-RELATED 6 490 IPR026055 GO:0080019
Acco01g3672 490 Pfam Male sterility protein 392 490 IPR033640 -
Acco01g3672 490 CDD FAR_C 390 489 IPR033640 -
Acco01g3672 490 Pfam Male sterility protein 17 318 IPR013120 -
Acco01g3672 490 CDD FAR-N_SDR_e 13 361 - -
Acco01g3672 490 Gene3D - 8 378 - -
Acco01g3672 490 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 339 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3672 Acco-ChrAcco01 52963384 52966225 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3672 113 489 Acyl Lipid Metabolism Gene Families AT4G33790 61.538 0.0 510
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3672 01 52963384 52966225 Acco08g0412 08 3234058 3237501 CCT
Acco01g3672 01 52963384 52966225 Acco01g3672 01 52963384 52966225 ECH