Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0370 ATGGCGCGGGCGGCGACTCTTCCCGTCGGGATTCTCATGGCCACTATTATTGCATTATTTTTATGTCGGACGACCACCGTGACATGTGAATCTCCGATGACTCTGTCTCTTGAAAGAGCAATTCCTCCGTTGAATAATGCAACAAAATTGAGTGAACTCAAAGCTTTCGACCATGCCAGACATCGAAGGTTGATTCAATCTTCTAATGGTACTGGTTTCTCTCTCCAGGGCACCTACGATCCTTACAAAGCCGGGATTTATTATACAAAAGTGCAATTGGGTTCTCCTCCAAGTACTTTTCATTTACAAGTAGACACAGGCAGCGACCTTCTCTGGGTCACCTGTAGCTCCTGTTCTGGCTGTCCGAATAAAACCCAACTTCGAATCCAGCTGAGTTCCTTCGATCCTGAGAAATCATCCACATCCTCACCGTCAACTTGTCAAGACTCGATATGTAACAGCGCATATCAGTCCCCAGAAGCCGTGTGTTCCAAAGATAATCGCTGCACTTACACATTCGCCTACGCAGATGGCAGTACCTCTTCTGGTTACTACCTCACTGATCTCTTTCATTTTTCCACCCCAACTTCTTCCAGCGCTTCTTCACCTATCATCTTCGGGTGTAGCACAGAGTTGAGGGGAAACTTGGTGGCGAATGAAAGAGGAGTGGATGGGATATTAGGGTTTGGGCAAGGCAAGGCATCAGTTATATCACAGCTCTCGTCAAAACGATTAGTCCCAAAAGTGTTCTCTCACTGCCTCCGAGGAGATGAACAAGGTGGAGGCACTTTGGTTCTTGGTGAGATTGTGGAGCCAAATATTGTTTTTACACCTCTCGTACCTGATGTTTCCGGGATTCATTACAATGTAGGTCTCAAGGGCATCGATGTGAAAGGCCAAGCGTTAGCGATTGATTCATCGGTTTTTGAAACAATGGAGAACCAAGGCACGGTTATTGATTCTGGAACAACTTTGGCTTACCTTCCTGAAGGGGTTTACGATGCCTTTCTCAATGCGATTACGGCTGCTGTTCCAGACGAATCGATTCCTGGTATCACCACTTACGTTTCATATGGAGCCCAATGTTTCTTAACGAAGAAAAGCGTCGCGGAAGTTTTCCCTAATGTGAGTTTCAACTTTGCCGGCGGTGCATCTATGGTTCTTCAGCCCAAGGACTACCTTTTACACCACATGACTCTCAATACCGGTCAAAAAGGGTGGTGTATGGGCATTCAGGAAATTCCGGGTTCTCAAGGGTTCGCTATTTTAGGAGATCTTTTATTAAAAGATAGAATTGTAGTTTATGATCTGGCTGGTCAACGCATTGGATGGGCTGACTATGACTGCTCGAAGCCCTTCAACGTGTCTGTAAGATCAAGGAGTACTGCATCAAGTGAAGCCGCGTCAAGGGATTGGTCCCATAAGACAAGGACCATAGCTCTCTTCCTACCGTTGCTCTGCATCTTCTTGTTTTCTTAG 1479 0.4611 MARAATLPVGILMATIIALFLCRTTTVTCESPMTLSLERAIPPLNNATKLSELKAFDHARHRRLIQSSNGTGFSLQGTYDPYKAGIYYTKVQLGSPPSTFHLQVDTGSDLLWVTCSSCSGCPNKTQLRIQLSSFDPEKSSTSSPSTCQDSICNSAYQSPEAVCSKDNRCTYTFAYADGSTSSGYYLTDLFHFSTPTSSSASSPIIFGCSTELRGNLVANERGVDGILGFGQGKASVISQLSSKRLVPKVFSHCLRGDEQGGGTLVLGEIVEPNIVFTPLVPDVSGIHYNVGLKGIDVKGQALAIDSSVFETMENQGTVIDSGTTLAYLPEGVYDAFLNAITAAVPDESIPGITTYVSYGAQCFLTKKSVAEVFPNVSFNFAGGASMVLQPKDYLLHHMTLNTGQKGWCMGIQEIPGSQGFAILGDLLLKDRIVVYDLAGQRIGWADYDCSKPFNVSVRSRSTASSEAASRDWSHKTRTIALFLPLLCIFLFS 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0370 492 FunFam Aspartic proteinase-like protein 2 269 456 - -
Acco08g0370 492 ProSiteProfiles Peptidase family A1 domain profile. 87 445 IPR033121 -
Acco08g0370 492 PRINTS Pepsin (A1) aspartic protease family signature 93 113 IPR001461 GO:0004190|GO:0006508
Acco08g0370 492 PRINTS Pepsin (A1) aspartic protease family signature 317 328 IPR001461 GO:0004190|GO:0006508
Acco08g0370 492 PRINTS Pepsin (A1) aspartic protease family signature 421 436 IPR001461 GO:0004190|GO:0006508
Acco08g0370 492 Pfam Xylanase inhibitor C-terminal 287 445 IPR032799 -
Acco08g0370 492 Gene3D Acid Proteases 269 456 IPR021109 -
Acco08g0370 492 Gene3D Acid Proteases 61 268 IPR021109 -
Acco08g0370 492 PANTHER ASPARTYL PROTEASES 35 443 IPR001461 GO:0004190|GO:0006508
Acco08g0370 492 SUPERFAMILY Acid proteases 82 452 IPR021109 -
Acco08g0370 492 Pfam Xylanase inhibitor N-terminal 87 267 IPR032861 -
Acco08g0370 492 CDD pepsin_A_like_plant 87 449 IPR034161 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0370 Acco-ChrAcco08 2890599 2895424 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0370 73 451 Miscellaneous Gene Families AT1G44130 28.141 1.98e-38 143
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3708 01 53274935 53278971 Acco08g0370 08 2890599 2895424 CCT