Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0209 ATGGACTCCCTCACTGTACTCTACATTGTTCTGGTATCCTACTTCTGCTTCTTGATCTGGAAATTCTTTAACCGCAAAAAAGACCAAGAATGTTACATTCTCGACTACCAATGTTACAGACCAACCGATGATCGAAAGCTCTCAACCGAGTTCTCTGGCAGAATCATCAAGCGAACCGAAAACCTCGGCCTCAGCGAGTACAAGTTCCTCCTCAAAGCCATTGTCAGCTCCGGCATCGGCGAGCAAACGTATGCCCCAAGAAACGTGTTCTCCGGCCGAGAAGCCTCACCAACTCTCGCTGACAGCGTCTCCGAGATGGAGGAGTTCTTCCACGACAGCATCGCCAAACTCCTCGCCAGGTCAGCCATTTCCCCCTCCGAAATTGACATCCTCGTCGTTAACGTCTCCATGTTCGCCTCCCTCCCCTCCCTCTCCTCTTTAATCATTAACCACTACAAAATGAGAGAAGACATTAAGGTTTACAACCTCACCGGAATGGGTTGTAGCGCCAGCCTTATTTCCCTTGACATTATCAAGAACATTTTCAAGACTCATAAAAACAAGTACGCTCTTTTGGTCACTTCAGAGTCTCTGAGCCCAAATTGGTATTCTGGTAACGACAAATCCATGGTTCTAGCTAATTGCTTGTTTCGTTCCGGAGGATGTGCCATTTTATTAACCAACAAAAGGTCCTTAAAGCATAAGGTCATGTTAAAGTTGAAGTGTCTTGTTAGGACCCATCACGGGTCAAGAGAAGAAGCTTACAACTGTTGCATTCAAAAGGAAGATGATCAAGGAAGGCGAGGGTTTCACCTGGGGAAGACACTCCCAAAGGCAGCCACAAGGGCTTTTGTAGACAACTTAAGGGTAATCTCACCTAAGATCTTACCCATGAGGGAGCTCCTAAGGTTCATGGTCGTGTCCTTAATCAAGAAACTCAACGTCATCGGAAGTTCGCCGCCAAAGTCCTCGTCGAGCGGCGGCGTAACAAAATCGCCGTTGAACTTCAAAACTGGGGTGCATCATTTTTGCTTACACACAGGAGGGAAAGCTGTTATCGACGGGATCGGAATGAGCTTGGATCTGAGCGAGTACGATCTGGAGCCAGCGAGGATGACACTACACCGTTTTGGGAACACTTCTGCGAGTAGCTTGTGGTATGTGTTAGGGTACATGGAGGCGAAGAAGAGGTTGAAGAAGGGTGATACAGTGTTTATGATAAGTTTTGGTGCAGGTTTTAAATGTAACAGCTGTTTGTGGGAGGTAGTGAGAGATCTGGGAAGTAAAAATGTGTGGGACGATTGTATTGATGACTATCCACCAGAGTCTCTGGCAAATCCATTCATGGAGAAGTATAGTTGGATCAATGATCTTACCGATGAGGATCTATCCAACGTGCAAATCCCAGATTTTCTCAAGTAA 1422 0.4641 MDSLTVLYIVLVSYFCFLIWKFFNRKKDQECYILDYQCYRPTDDRKLSTEFSGRIIKRTENLGLSEYKFLLKAIVSSGIGEQTYAPRNVFSGREASPTLADSVSEMEEFFHDSIAKLLARSAISPSEIDILVVNVSMFASLPSLSSLIINHYKMREDIKVYNLTGMGCSASLISLDIIKNIFKTHKNKYALLVTSESLSPNWYSGNDKSMVLANCLFRSGGCAILLTNKRSLKHKVMLKLKCLVRTHHGSREEAYNCCIQKEDDQGRRGFHLGKTLPKAATRAFVDNLRVISPKILPMRELLRFMVVSLIKKLNVIGSSPPKSSSSGGVTKSPLNFKTGVHHFCLHTGGKAVIDGIGMSLDLSEYDLEPARMTLHRFGNTSASSLWYVLGYMEAKKRLKKGDTVFMISFGAGFKCNSCLWEVVRDLGSKNVWDDCIDDYPPESLANPFMEKYSWINDLTDEDLSNVQIPDFLK 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0209 473 SUPERFAMILY Thiolase-like 18 231 IPR016039 GO:0016746
Acco08g0209 473 CDD CHS_like 31 420 - -
Acco08g0209 473 Gene3D - 55 422 IPR016039 GO:0016746
Acco08g0209 473 PIRSF Very_long_ch_3-ktacl-CoA_syn 1 454 IPR012392 GO:0006633|GO:0016020|GO:0016747
Acco08g0209 473 PANTHER 3-KETOACYL-COA SYNTHASE 13 441 IPR012392 GO:0006633|GO:0016020|GO:0016747
Acco08g0209 473 Pfam FAE1/Type III polyketide synthase-like protein 25 312 IPR013601 GO:0006633|GO:0016020|GO:0016747
Acco08g0209 473 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 340 421 IPR013747 -
Acco08g0209 473 SUPERFAMILY Thiolase-like 243 423 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0209 Acco-ChrAcco08 1461974 1463395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0209 19 470 Acyl Lipid Metabolism Gene Families AT2G28630 72.113 0.0 690
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3842 01 54153397 54154806 Acco08g0209 08 1461974 1463395 CCT