Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0185 ATGGCAGCCAATTCTTCCAATGGGGATCACCAAACACCGACGAAGTCACCGCCTTTGCCATCTCCACTGCGTTTTTCCAAATTCTTTCAGTCAAATATGAGAATTTTGGTTACTGGAGGAGCTGGATTTATTGGCTCTCACCTGGTGGACAGATTGATGGAAAATGAAAAAAATGAGGTAATAGTTGTTGATAACTACTTCACTGGATCCAAAGACAATCTCAAAAAATGGATTGGCCATCCAAGATTTGAGCTCAAGCGTCATGATGTCACAGAGCCTTTGTTGGTTGAAGTTGATCAGATTTACCATCTTGCTTGTCCTGCTTCTCCAATCTTCTACAAATACAATCCTGTGAAGACAATAAAGACAAATGTGATTGGTACGCTGAACATGCTAGGGCTTGCAAAACGACTTGGTGCAAGGATTTTGCTTACATCAACATCAGAAGTATATGGAGACCCTCTTGTGCACCCACAGCCTGAAACTTACTGGGGCAATGTTAATCCCATAGGGGTTCGGAGCTGCTATGATGAGGGAAAGCGTGTGGCCGAAACTTTGATGTTTGATTATCATAGACAGCATGGAATAGAAATACGTGTTGCAAGAATCTTTAACACATATGGACCACGCATGAATATTGATGATGGGCGTGTTGTCAGCAACTTCATTGCACAGGCGCTTCGGGGTGAACCGTTGACGGTCCAATCTCCAGGAACACAAACTCGCAGTTTCTGTTATGTGTCTGACCTGGTTGACGGCCTTATCCGTCTCATGGAAGGGGAACACACTGGTCCAATCAATCTTGGAAACCCAGGTGAATTTACAATGACTGAACTCGCAGAGACGGTGAAAGAGCTTATCAATCCACAGGTAGAAATAAAGATGGTAGAGAATACTCCCGATGACCCTCGACAGAGAAAACCTGATATAACGAAGGCAAAGGAATTGCTTGGTTGGGAACCCAAGGTCAAGTTGTGGGATGGCCTTCCCCTTATGGAAGAGGATTTTCGTCTCAGGCTTGGAGTTGATAAGAACTAA 1038 0.4412 MAANSSNGDHQTPTKSPPLPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDRLMENEKNEVIVVDNYFTGSKDNLKKWIGHPRFELKRHDVTEPLLVEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRLGARILLTSTSEVYGDPLVHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRVARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQSPGTQTRSFCYVSDLVDGLIRLMEGEHTGPINLGNPGEFTMTELAETVKELINPQVEIKMVENTPDDPRQRKPDITKAKELLGWEPKVKLWDGLPLMEEDFRLRLGVDKN 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0185 345 MobiDBLite consensus disorder prediction 1 21 - -
Acco08g0185 345 CDD UGD_SDR_e 33 337 - -
Acco08g0185 345 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 20 341 IPR044516 GO:0042732|GO:0048040|GO:0070403
Acco08g0185 345 FunFam UDP-glucuronic acid decarboxylase 6 32 341 - -
Acco08g0185 345 Gene3D - 32 339 - -
Acco08g0185 345 Pfam GDP-mannose 4,6 dehydratase 36 329 IPR016040 -
Acco08g0185 345 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 28 337 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0185 Acco-ChrAcco08 1248931 1252860 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0185 30 329 Miscellaneous Gene Families AT1G02000 24.478 1.50e-16 78.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3858 01 54272261 54275277 Acco08g0185 08 1248931 1252860 CCT