Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2221 ATGGGATTGCATGAAAAAATTTGGCACAATGTTGCTGGGCTTGCATGCGACGTGTTCATAAACTACCGTACGGTCGATACGAGACGTTCGCTGGTTCGTTTGTTGTACAACCATCTGACGCAGCAAGGATGCAAGCCGTTCTTGGACGCAGAAAACCTGAGACCAGGAGATAGGTTGTTTGACACTATTGACAAGGCTATACGAGGATGTAATGTTGGGGTTGCTGTGTTTTCGCCTCGTTATTGTGACTCCTATTACTGTCTCCATGAGCTCTCACTCATCATGGAATCAAAGAAACGAATCGTTCCTATTTTCTATGATGTGAAGCCGTCGCAGCTTCGGATTGTGGACAATGGAATATTGAGTTGTTCAAAGAAAGATCTCAAAAGGTTTAATTTTGCAATTGAAGAAGCTAAAAGCATTGTGGGGCTGCCCTTCGATTCCTCAAAAGATGATTGGTCGGAGCTGGTACTTAAAGCTTCAAATGCAGTGATGAGCAAATTGCATGAAGAAAGCAGTGCATGA 525 0.4362 MGLHEKIWHNVAGLACDVFINYRTVDTRRSLVRLLYNHLTQQGCKPFLDAENLRPGDRLFDTIDKAIRGCNVGVAVFSPRYCDSYYCLHELSLIMESKKRIVPIFYDVKPSQLRIVDNGILSCSKKDLKRFNFAIEEAKSIVGLPFDSSKDDWSELVLKASNAVMSKLHEESSA 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2221 174 PANTHER TMV RESISTANCE PROTEIN N-LIKE 16 147 - -
Acco06g2221 174 Gene3D - 13 173 IPR035897 -
Acco06g2221 174 ProSiteProfiles TIR domain profile. 14 168 IPR000157 GO:0007165
Acco06g2221 174 SMART till_3 15 163 IPR000157 GO:0007165
Acco06g2221 174 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 114 IPR035897 -
Acco06g2221 174 Pfam TIR domain 18 114 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2221 Acco-ChrAcco06 17331490 17333031 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2221 17 173 Miscellaneous Gene Families AT1G57670 27.168 1.81e-13 65.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco06g2218 06 17229705 17231289 Acco06g2221 06 17331490 17333031 CCT
Acco06g2221 06 17331490 17333031 Acco06g2221 06 17331490 17333031 ECH