Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2218 ATGGGATTGCATGCAAAAATGTGGCACAACGTTGCTGGGCCTGCATGCGACGTGTTCATAAACCACCGTACGGTCGATACGAGACGTTCGGTGGTTCGTTTGTTGTACAACCATCTGACGCAGCAAGGATGCAAGCCGTTCTTGGACGCAGAAAACCTGAGACCAGGAGATAGGTTGTTGGACTATATTGATAAGGCTATACGAGGATGTAATGTTGGGGTTGCTGTGTTTTCGCCTCGTTATTGTGATTCCTATTACTGTCTCCATGAGCTCTCACTCATCATGGAATCAAGGAAACCAACCGTTCCTATTTTCTATGATGTGAAGCCGTCGCAGCTTCGGATTGTGGGCAGTAGAATATTGAGGAGTTGTTCACAGAAAGATCTCAGGAGGTTTGAATTTGCAATTGAAGAAGCTAAACGCATTGTGGGGTTGCCCTTCGATTCCTCAAAAGATGATTGGTCGGAGCTGGTACGTAAAGCTTCAAATGCAGTGATGAGCAAATTGCATGAAGAAAGCAGTGCATGA 528 0.4583 MGLHAKMWHNVAGPACDVFINHRTVDTRRSVVRLLYNHLTQQGCKPFLDAENLRPGDRLLDYIDKAIRGCNVGVAVFSPRYCDSYYCLHELSLIMESRKPTVPIFYDVKPSQLRIVGSRILRSCSQKDLRRFEFAIEEAKRIVGLPFDSSKDDWSELVRKASNAVMSKLHEESSA 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2218 175 Gene3D - 13 174 IPR035897 -
Acco06g2218 175 ProSiteProfiles TIR domain profile. 14 165 IPR000157 GO:0007165
Acco06g2218 175 Pfam TIR domain 18 119 IPR000157 GO:0007165
Acco06g2218 175 SMART till_3 15 164 IPR000157 GO:0007165
Acco06g2218 175 PANTHER TMV RESISTANCE PROTEIN N-LIKE 16 149 - -
Acco06g2218 175 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 114 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2218 Acco-ChrAcco06 17229705 17231289 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2218 14 165 Miscellaneous Gene Families AT1G57670 26.994 2.23e-13 65.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco06g2218 06 17229705 17231289 Acco06g2221 06 17331490 17333031 CCT