Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0832 ATGGCTGTGTTTCTCCTTGCTATATTAATGGTACTGATGGTTCCTCCAGGCCATGCCTCGTGGCCACCTTCACCAGGCTACTGGCCAAGCTCTAGATTCAGGTCTATGAGCTTCTACAGAGGATTTACAAACCTCTGGGGTCCTCAGCATCAAAGTCTAGACCAAAACACAGTATCAATTTGGCTCGATAGAACCTCAGGAAGTGGGTTCAAGTCGGTTCATCCCTTTCGGTCCGGGTACTTTGGTGCTTCTATTAAGCTCCAACCGGGCTATACTGCAGGAGTTATCACAGCTTTTTACCTTTCGAACAACGAAGCACATCCAGGCTTCCACGATGAAGTGGACATAGAATTTCTGGGGACAACATTTGGAAAACCTTATACTCTGCAGACAAATGTGTACATAAGAGGGAGTGGTGACGGCAAGATCATAGGCAGGGAAATGAAGTTCCATCTCTGGTTTGATCCCACCAAAGATTTTCATCACTACGCTATACTCTGGAGCCCTAAGGAAATAATATTCCTAGTGGATGATGTGCCGATAAGGAGGTACCCGAAGAAGAGTGATGCAACATATCCAGTGAGGCCAATGTGGGTATATGGTTCGATATGGGATGCGTCGTCATGGGCAACTGAAGATGGAAAGTACAAAGCAGATTACAGATACCAACCATTTGTGGCCAAGTACAACAATTTCAAAGCCAGTGGTTGCTCAGCCCATGCGCCGATTTGGTGCCGGCCGGTCTCTGTTTCCCCCTACAGGTCCGGTGGGTTGAGCCGCCAGCAATATAGAGCAATGGGATGGGTTCAAAGATACCATATGGTTTATAACTATTGCAATGACCCAAAAAGAGACCGCAGGCTAACGCCGGAGTGTTGGGGTTGA 885 0.4746 MAVFLLAILMVLMVPPGHASWPPSPGYWPSSRFRSMSFYRGFTNLWGPQHQSLDQNTVSIWLDRTSGSGFKSVHPFRSGYFGASIKLQPGYTAGVITAFYLSNNEAHPGFHDEVDIEFLGTTFGKPYTLQTNVYIRGSGDGKIIGREMKFHLWFDPTKDFHHYAILWSPKEIIFLVDDVPIRRYPKKSDATYPVRPMWVYGSIWDASSWATEDGKYKADYRYQPFVAKYNNFKASGCSAHAPIWCRPVSVSPYRSGGLSRQQYRAMGWVQRYHMVYNYCNDPKRDRRLTPECWG 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0832 294 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 256 292 IPR010713 GO:0005618|GO:0016762|GO:0044042|GO:0048046
Acco06g0832 294 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 35 292 IPR044791 GO:0004553
Acco06g0832 294 PIRSF EndGlu_transf 1 294 IPR016455 GO:0010411|GO:0016762|GO:0042546
Acco06g0832 294 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 17 229 IPR000757 GO:0004553|GO:0005975
Acco06g0832 294 FunFam Xyloglucan endotransglucosylase/hydrolase 25 293 - -
Acco06g0832 294 Pfam Glycosyl hydrolases family 16 41 221 IPR000757 GO:0004553|GO:0005975
Acco06g0832 294 Gene3D - 18 292 - -
Acco06g0832 294 SUPERFAMILY Concanavalin A-like lectins/glucanases 60 279 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0832 Acco-ChrAcco06 5488654 5489833 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0832 1 292 Glycoside Hydrolase AT3G44990 65.529 9.57e-143 402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1498 02 11481702 11483248 Acco06g0832 06 5488654 5489833 CCT
Acco06g0832 06 5488654 5489833 Acco06g0832 06 5488654 5489833 ECH