Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1498 ATGGCTCTCCTTCTCTTCATTATTGTAATCTTTATGATCCCTTCAAGCAGTGCCTACGGGCCACCTTCACCTGGCTGCTGGCCAAGCTCCAAGTTCAGGTCTATGAGCTTTTACAAAGGATTTAGAAACCTCTGGGGTCCTCAGCACCAAACACTGCACAAAAATGAATTAAGAATATGGCTTGATAAAACCTCAGGTAGTGGCTTCAAGTCTGTTCGCCCATTCCGGTCTGGTTACTTCGGTGCTTCCATGAAGCTCCAACCTGGATATACTGCAGGCGTTATATCATCCCTCTATCTTTCAAACAATGAAGCACATCCAGGCTTCCATGATGAGGTGGACATTGAGTTTCTGGGGACAACATTTGGGAAGCCTTACACTTTGCAGACCAATGTGTATATAAGAGGAAGTGGTGATCGGAAAATTATAGGCAGAGAGATGAAATTCCATCTCTGGTTTGATCCTACCCAAGATTTTCATCACTATGCTATGCTGTGGAGTCCTAAGGAAATAATATTCTTTGTCGATGATGTGCCCATAAGGAGATACCCGAGGAAGAGTGCGGCAACTTTTCCAGTGAGGCCAATGTGGCTTTATGGCTCAATATGGGACGCTTCATCATGGGCAACAGAAGATGGCAAGTACAAAGCTGATTACAGATATCAGCCTTTTGTTGCAAGGTACACCAACTTTAAGGCCAGTGGTTGCTCCGCCAATGCCCCAGGCCAGTGCCACCCCGTCTCCGCCTCGCCGTACCGCTCCGGTGGCCTTACACGACAACAATATGCGGCCATGAGATGGGTACAGAGATACCACATGGTTTACAATTATTGCAGGGATCCTAAAAGAGACCACAGACTAACCCCAGAATGCGGGCATTCCCACTGA 888 0.4707 MALLLFIIVIFMIPSSSAYGPPSPGCWPSSKFRSMSFYKGFRNLWGPQHQTLHKNELRIWLDKTSGSGFKSVRPFRSGYFGASMKLQPGYTAGVISSLYLSNNEAHPGFHDEVDIEFLGTTFGKPYTLQTNVYIRGSGDRKIIGREMKFHLWFDPTQDFHHYAMLWSPKEIIFFVDDVPIRRYPRKSAATFPVRPMWLYGSIWDASSWATEDGKYKADYRYQPFVARYTNFKASGCSANAPGQCHPVSASPYRSGGLTRQQYAAMRWVQRYHMVYNYCRDPKRDHRLTPECGHSH 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1498 295 FunFam Xyloglucan endotransglucosylase/hydrolase 25 293 - -
Acco02g1498 295 SUPERFAMILY Concanavalin A-like lectins/glucanases 59 279 IPR013320 -
Acco02g1498 295 PIRSF EndGlu_transf 1 295 IPR016455 GO:0010411|GO:0016762|GO:0042546
Acco02g1498 295 Gene3D - 17 291 - -
Acco02g1498 295 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 253 291 IPR010713 GO:0005618|GO:0016762|GO:0044042|GO:0048046
Acco02g1498 295 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 16 228 IPR000757 GO:0004553|GO:0005975
Acco02g1498 295 Pfam Glycosyl hydrolases family 16 39 220 IPR000757 GO:0004553|GO:0005975
Acco02g1498 295 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 34 291 IPR044791 GO:0004553
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1498 Acco-ChrAcco02 11481702 11483248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1498 1 291 Glycoside Hydrolase AT3G44990 66.212 3.77e-144 405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1498 02 11481702 11483248 Acco06g0832 06 5488654 5489833 CCT
Acco02g1498 02 11481702 11483248 Acco02g1498 02 11481702 11483248 ECH