Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0540 ATGGAACTCAGTAAAGTCACGTTGGAGATCTTCTCTAAACTCGAGCAGAAATGGCTCTTCTCTCGCTGCGAAACCACCAACAAGACCCGCATTCTCAGCATTGACGGCGGAGGAACCACCGTCGTTGTTGCCGGCGCCGCCCTCGTTCGCCTCGAGGACCAGATCCGCCTCCAGACCCGCGATCCCCAAGCTCAAATCGCAGACTTCTTTGACATCATTGCCGGGACCGGCATTGGTGCCATCCTTGCCGCCATGATCACCGCCGATGACGGCTCCGGCAGGCCCCTCTACACTGCCAGAGATGCCGTGCGCGTCATCACACAGAGGAATTCTGAACTCTTTAAGCCTGAACTCCCCAGAGTTCTCCGCTGGCGGCGTCGGAGATTTTCTTCCAAGAGCATGGACAAGGTGGTGAAGGAAGTGTTTCGGAGAAGAGAGGATGGACGACTGTTGACATTGAAGGACACGTGTAAGCCCCTGCTCATACCTTGCTTTGACCTCAAGAGTGCCGCCCCGTTCGTGTTCTCACGCGCTGACGCGTCCGAGTCTCCCAGTTTCAACTTCGAGCTCTGGAAAGTTTGTCGCGCCACCTCAGCCACGCCGAGCCTCTTCAAGCCTTTTCAGTTTACCTCCCTCGACGGAAATACCTCCTGCCGGGCCATCGATGGTGGACTGGTGATGAACAACCCGACGGCGGCGGCCGTGACTCACGTGCTGCACAACAAGCGTGACTTTCCTTCAGTGAGTGGCGTGGGTGATCTCTTGGTCCTCTCCATAGGAAATGGGACGATGTCGATCATCGGAGCTTCAGGTAGGAAGGTGGGTGAGAAGGAGGAGACACTGTGTTCGTTGTCGTCCATGGTTGACATTGTGGTGGATGGCGTGTCGGAGACCATTGACCAAATGCTGGGCAATGCCTTCTGTTGGAATAGTACGGACTATGTCAGACTCCAGGCGTTGGGTCTGGGGAGTGGGGAGGAGGTGCTGAAGGAGAAAGGCGTGGAGTCGTTACCGTTTGGCGGGAAGCGGCTACTGAAAGAGACTAACGGACACAGAATCGATAGCTTTGTGCAGCGTCTTGTTGCTTCTGGAAAGGCCAACGCAGCCTCTGTTAACCCTATCGCCGGCAGTTAG 1134 0.5608 MELSKVTLEIFSKLEQKWLFSRCETTNKTRILSIDGGGTTVVVAGAALVRLEDQIRLQTRDPQAQIADFFDIIAGTGIGAILAAMITADDGSGRPLYTARDAVRVITQRNSELFKPELPRVLRWRRRRFSSKSMDKVVKEVFRRREDGRLLTLKDTCKPLLIPCFDLKSAAPFVFSRADASESPSFNFELWKVCRATSATPSLFKPFQFTSLDGNTSCRAIDGGLVMNNPTAAAVTHVLHNKRDFPSVSGVGDLLVLSIGNGTMSIIGASGRKVGEKEETLCSLSSMVDIVVDGVSETIDQMLGNAFCWNSTDYVRLQALGLGSGEEVLKEKGVESLPFGGKRLLKETNGHRIDSFVQRLVASGKANAASVNPIAGS 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0540 377 Pfam Patatin-like phospholipase 32 234 IPR002641 GO:0006629
Acco06g0540 377 Gene3D Cytosolic phospholipase A2 catalytic domain 20 371 - -
Acco06g0540 377 PANTHER PATATIN-LIKE PROTEIN 6 1 373 - -
Acco06g0540 377 CDD Pat17_PNPLA8_PNPLA9_like 31 319 - -
Acco06g0540 377 SUPERFAMILY FabD/lysophospholipase-like 27 321 IPR016035 -
Acco06g0540 377 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 32 235 IPR002641 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0540 Acco-ChrAcco06 3362385 3363613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0540 1 375 Acyl Lipid Metabolism Gene Families AT3G63200 67.969 0.0 528
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1879 02 14922982 14924335 Acco06g0540 06 3362385 3363613 CCT
Acco06g0540 06 3362385 3363613 Acco06g0540 06 3362385 3363613 ECH